Tachysurus vachellii: 132850988
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Entry
132850988 CDS
T09596
Symbol
cngb1a
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-3
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
tvc
Tachysurus vachellii
Pathway
tvc04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
132850988 (cngb1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tvc04040
]
132850988 (cngb1a)
Ion channels [BR:
tvc04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
132850988 (cngb1a)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
132850988
NCBI-ProteinID:
XP_060733488
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Position
9:7106237..7139919
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AA seq
1341 aa
AA seq
DB search
MFSWVVKVVPQPPEKPTKLEGEGKGNTPQTSEQKASVKDQEVKKAANPEKPNEDGVSEEK
STQGSVLNWISQGLTSALPQPAATPNKDKTDSDTKHQEENINSKANEETGVINWIVQGLG
KVVPQPDDKHKQQTECQEVTEVPKVVAEVKVEQTVVKEIKMEPEPPPPPPPPVPVVEVVP
DEEAEGDNSITPRVMEWIKQGLEKVVPQPGHATPSTTDTSDKKEPATDTAPPPPKAPEVS
VAEETTSGTTMEEESNVVGWIVQGLGRIMPQPVLKPKEDTSDSVQSIFILQEEFVQEENL
VLERDMVLEEVVSDWEQQQMEQSCLKKQAEVQVEDQTQPLLDNLHYTTPNMLFMQQEDAE
TQTERWTPLIENIRREAEEAALVSLQERLEREHLEAARMAEVLARQAAELAVRQLEEEHN
VIRVTEPEPLSEPDSGELLSNIQEEENEDDPELQPLREESEEDSGESKNAEADIKRCLVD
VCPVEELKTQKEESPEQPPPKESTPERQVEIVHTPPLEPAVQAEPEGEDPAKAKSPSPVM
SPVVPSAVSCPSPPAVIQENEALKEECGECPHLNVEEVDDGSIPTVPQIVEPQESNGGTL
TIPIPVMANQSKAVLVERVTQPDEQVEEEETEKEEDLKSQRGLLTVEEAERPLSSASQTS
VVVNERLQELIKLFKERTERTKERLIDPDESEEESPTATPSKKAVAAPPPPPPPPPPPEE
KKDVPAVVESEEEQFLEFMGYQVKVPKIPPIPDWMRAIIEYRFPSSIDPYTDIIYVVWLF
FVMCAWNYNVWLIPVRWAFPYQTPENIHLWLLADYFCDTIYILDIVVFQPRLQFVRGGDI
VCDKKDMREQYMKTERFKMDMISLFPLEVLYYFTGVKSILRFPRLLKYMAFFEFNDRLEA
VMKKAYIYRVIRTSAYLLYSLHCNACLFYWGSDYEGLGSTKWVYDGRGNSYIRCYYFAVK
TLITIGGLPDPTTVFEIVFQLVNYFVGVFAFSIMIGQMRDVVGAATAGPAYYRSCVDSTV
KYMTAYRIPREVQNRVKTWYDYTWQSQGMLDEQELLIQLPDKMRLDIAVDVNYTIVSRVA
LFQGCDRQMIFDMLKRLKSVVYLPGDYVCKKGEIGREMYIIKAGEVQVVGGPDGKTVFVT
LRAGSVFGEISLLAVGGGNRRTANVVAHGFANLFILDKKDLSEIMVHYPESQKILRKKAK
KMLTKDKKPPEEKGPDKETGQVIPTRPETPKLFKAALLMGKGETFAKLKETYKDSEATLK
TSDSMTTTAAPVPPPSPIHRRSPVQRTVTQDDEDMVAETTDSTMIIRITPHQHGEEILSI
EMAEEEDGKVKETEQEEKKEE
NT seq
4026 nt
NT seq
+upstream
nt +downstream
nt
atgtttagttgggtggtaaaagttgttcctcaacctccagagaagcctacaaagctagaa
ggggaaggcaaaggcaatacaccccagacatcagaacaaaaagcatcagttaaagatcaa
gaggtgaaaaaagcagccaatcctgagaagccaaatgaggatggagtctcggaagaaaaa
agtactcagggcagtgtattgaactggatctctcagggtttgaccagcgccctcccccaa
cctgcagctacacctaacaaggacaaaacagacagtgataccaagcaccaggaggaaaac
atcaacagtaaagcaaatgaagagacaggggtgataaactggattgtgcaaggattaggc
aaagtggttccacaacctgatgacaagcacaaacagcagacagaatgccaggaggtcact
gaggttccaaaagtggtggcagaggtaaaggtggagcaaactgtggttaaggagattaaa
atggagcctgaaccacctcctcctcctcctcctccagtccctgtggtggaggtggttcct
gatgaagaagctgaaggagacaattccataaccccaagggtgatggagtggataaagcaa
ggtcttgagaaggtggttccacagccaggacacgccacaccatctactacagacacttca
gataaaaaggaacctgctacagataccgcacctccgcctccaaaggcacctgaagtctca
gtagctgaggaaaccaccagtggaacaaccatggaggaggaatccaatgtggttggctgg
attgtgcagggactcggtcgcattatgccacagcctgttctgaaaccaaaagaggacacg
tcggattccgttcagagcatcttcatcctgcaggaggagtttgtgcaggaggagaacctg
gttctggagagggacatggtgctggaggaagtggtctcagactgggagcagcagcagatg
gagcagagctgtttgaagaaacaggctgaagttcaggttgaggatcagactcaacctctg
ctggacaacctacactacaccacacctaatatgctgttcatgcagcaggaggatgctgag
acacaaacagagcgctggactcctctgatagagaacattagacgggaggctgaggaagcc
gctttggtctctttgcaagagaggctggagcgtgagcatctggaggcggcgaggatggca
gaggtgttggcacgtcaggctgctgaactggcagtgagacagctggaggaggaacacaat
gtaatcagagtcacagagccagaacccctctctgaaccagacagtggagagctactttcc
aacatccaggaggaagagaacgaagatgacccagagttacagccactgcgtgaggagagt
gaggaagacagcggagaaagtaaaaatgcagaagcagacattaagaggtgtctggtggac
gtgtgccctgttgaggagcttaaaacacaaaaggaggagtcaccagagcaacctcctccg
aaggaatccacacctgaacgtcaagttgagatagtacacactccaccattagagccagct
gttcaagcagaacctgagggagaagatcctgcaaaagcaaagagcccttcacctgtaatg
agtccagttgtaccctcagctgtttcatgtccctctcctccagctgttatacaggaaaat
gaggcacttaaagaggaatgtggagaatgtcctcatctgaatgtagaggaagttgatgac
ggatccattcctactgtgcctcaaattgttgaaccccaggagtcgaacggtggcaccctc
actattcccattcctgtgatggccaaccagagcaaagcagtgcttgttgagagggttacc
cagccagatgaacaagttgaagaggaagaaacggagaaagaggaagatctgaaaagccag
cgtggcctcctcactgtggaggaagcagagcgtcctctttcttcggccagtcagacaagt
gttgtggttaacgagcgtctgcaggagctgatcaagctgtttaaagaacgaacagagcgg
actaaagagaggctgattgacccagatgagtctgaggaagagagtcccacagcaacacct
tccaaaaaggccgttgctgctcctcctcctccacctcctccgcctcctccgcccgaggag
aagaaagatgttcctgctgttgttgagagtgaagaggagcagttcctggagttcatgggc
taccaagtcaaagtgcccaagataccaccgataccagactggatgagagccatcatagag
tatcgtttcccttccagcatcgatccttacactgatataatctatgtggtgtggctgttt
ttcgtgatgtgtgcgtggaattataacgtgtggctgatcccggtgcgttgggcgttccca
tatcagactccagaaaacatccacctgtggctgcttgctgactatttctgtgacaccatc
tacatcctggacattgtggtctttcagcccagactacagtttgtccgtgggggagatata
gtgtgtgataaaaaggatatgagggaacaatacatgaaaacagaacgatttaagatggac
atgatcagtttgtttcccctggaggttttgtactatttcacaggagttaaatccattttg
cgcttcccacgtcttttaaagtacatggcattctttgaatttaacgatcgtctggaggcg
gtgatgaaaaaagcatacatttacagagtgatccggaccagtgcgtacttgctgtactca
ctacactgcaatgcctgtctgttctactggggctctgattatgaaggccttggctccact
aaatgggtctacgatggcagaggcaacagttacatccgctgctactactttgctgtaaaa
accctgatcacaatcggaggcctcccagatcccaccacagtcttcgaaatcgtctttcag
ctggtcaattactttgtcggtgtgttcgctttctcgattatgattggtcagatgagagat
gttgtaggagcagctactgcaggaccggcgtactataggtcgtgtgtggacagcacagta
aagtacatgactgcttatcgcatcccaagagaggttcagaacagagtcaagacctggtat
gactatacgtggcaatcgcaaggcatgctggatgaacaggaattgctcatccagcttcct
gataagatgcgtctggacatcgccgtggatgtaaactacaccattgtcagcagagtggcc
ctcttccaaggctgtgatagacagatgatttttgacatgttgaagagactgaagtctgtg
gtctacctccctggggattatgtgtgtaagaagggtgagatcggcagggagatgtacatc
atcaaggccggtgaggtgcaggtggttggaggccccgatggtaaaactgtgtttgtgact
ttgagggctggatctgtgtttggggaaatcagcttgcttgctgtagggggagggaaccgg
cgcacagctaatgtggtggcacatggctttgctaacctcttcattctggataagaaagac
ctctctgagatcatggtgcattaccctgagtcccagaaaatactgcgcaagaaggctaag
aagatgctaacgaaggataagaaacctccagaagaaaagggtccggataaggagactggt
caggtgattccaacacggcctgagactcccaaactctttaaggccgccctgctgatgggc
aaaggagaaacgttcgccaaactgaaagagacatacaaagacagtgaagccacactaaag
acctccgacagcatgaccaccacagcagcgcccgttccccctccctcacccattcatcgt
cgctctcccgtccagcgcacagtcacgcaggatgacgaagacatggtggcagagaccaca
gacagcacgatgatcatccgcataaccccacaccaacatggagaggagatcctcagcatt
gaaatggcagaggaggaagatgggaaggtgaaggagaccgagcaggaggagaagaaagaa
gaatag
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