Tachysurus vachellii: 132856372
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Entry
132856372 CDS
T09596
Name
(RefSeq) LOW QUALITY PROTEIN: cyclic nucleotide-gated cation channel beta-1-like
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
tvc
Tachysurus vachellii
Pathway
tvc04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
132856372
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tvc04040
]
132856372
Ion channels [BR:
tvc04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
132856372
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
132856372
NCBI-ProteinID:
XP_060741931
LinkDB
All DBs
Position
13:2654558..2689510
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AA seq
1561 aa
AA seq
DB search
MFNWMVKVVPQTLAGPEHAEEQEQRSAGGNARGNRGRLKSVKSIRDDDQASESSQSSVQS
GLLNWLSNGFVSALPQPTRSPTLHRAAIAESHQDEDSDRPGVIGWISGGIEKVVPQPETK
YMEKGEKPDEENTEVYDIKELPDAEPLPNVPVVEMISEDEVSEAHRSPQVPPGGVVQWIK
TGFQSALPYRMPRPPDHSETGSQRSSRCSDKVFSPPPESVTSLTEVEPKVNMMGWITHGL
GLALPQPVIRSKEDYGVVAETVTQHAVHSRPNSTDLVLEDVNAEDVQDQDQYLDQKNISE
HPSSPKRADPEDRSDPETLSPSAPTSSLNQEDVETQTGRWTSFIESIKREAEDIAMATLE
ERLRQERLEMARMAEKVARHAAEVTVRELAGARVTVHTPILEVEEEAEPELQELKDEEKE
PEILHSKSTECQELSPVEKFTQEAEGPVEDPQEAEEELEDEDRVEEPSASPEPVRPEAFP
TEEPEEEEEEEEESDDSSEAESEPEPITRQPRSCDGAGVKQNVTQDNRMLNEEGTYVPSR
CDALKACFMRIPYAPVCLDRFNQLLKENNITPPQVPSVPKLPSRLSQITQHFPHLPTRLN
QLPQQITEIPQRISQRVSKLPEHFPSFPQKLPTFPERFSCRFPNGLPKHPEKLPDFAQHF
SSLPQRLSNIPDHLINLPQYLSSIPRQCYTSLHRLSSVRPQMMPKPQQQQQSLDLELDHL
VRQSPIHISRTPSPSSPGSVLDLPNVPFYPRLPPISPSHTFSGLSNPTFNAEDEATSARP
SASSRMSVHPAVNVEDMDSDNEQCGRTSHHMPQIITPQDPNLKTLTVPGSSKSSRFRERK
PQTIWTKIKKLYSSGDEEDEELETAVRAWPSQSSITSADDALKERPSSTASQASTMVNER
LQELVKLLKERTERAKEKLIDPDDLDDETSTATPAAPPPPPPEPQKEPEPVDENQLAPTE
QEDEQEAYIKLLCFKVKPQSKIGRLIRYRFPASIDPFTNLGYVLWLFLVTLAWNWNVWMI
PVRWAFRYDVEGSLYLWLLADYLCDTIYILDVLLFQPRLQFIRGGDIVSDKKEMRAHYMK
DLRFKLDVVSLFPLEFFYFLDGVKPLLRCPRILKILSFFEFNTRLEGILTKAYVYRVIRT
TSYLLYSLHVNACLYYWMSTVQGLNSTAWVYDGKGNEYIRCFYFAVKTLITIGGLPEPTV
LGEYIFQLVNYFTGVFAFSIMIGQMRDVVGAATADQTHYRSCMDSTVKYMGSNRIPKDVQ
HRVKTWYNYTWQSQGMLDEEELLVQLPDKMRLDIAVDVNYSIVSKVPLFEGCDRQMIYDM
LKRLRSVVYLPGDYVCKKGEVGREMYIIKSGEVQVVGGPDGKTVFVTLKAGSVFGEISLL
SVGGGNRRTANVIAHGFANLFILDKKGLNEILVHYPESQKLLRRKAKKMLADKKPEKKTE
EEKEPVRVIPPRAETPKLLKAAMEMTEKSGLRGTLAKLKGKKNNKSSVSLQPSICSSVLP
GSPIMRQHSEQEADILSQISDSTIHGPPISPSGLGDERRSALEGPALTERTIEGKDKTDD
E
NT seq
4686 nt
NT seq
+upstream
nt +downstream
nt
atgtttaactggatggtgaaggtggtgccacagaccctggctggtcctgaacatgctgag
gagcaggagcagagatctgcaggtggaaatgctcgaggaaacagagggagactgaagtca
gtcaaatcaatccgggacgatgatcaagcatcagaatcgtcccagagcagtgttcagagt
gggttgctgaactggctgtctaatggtttcgtgagtgccctgccacaacctaccagaagc
ccgaccctccacagagccgccatcgccgagtcacatcaagatgaagattcagacagacca
ggagtcattggctggatctcggggggaatcgagaaggtcgtcccacagcctgaaaccaaa
tacatggagaagggcgagaaacctgatgaagaaaatacagaggtttatgatattaaagaa
cttccagatgcagagcctcttcctaatgttccagtggtggagatgatctctgaggacgag
gtgtctgaagcacatcgttctcctcaggtcccaccgggtggagtggtacagtggataaag
accgggttccaaagcgctcttccgtaccgcatgccccgtccaccagaccactcagaaacc
ggctcccaaagatcatcacgctgctcagataaagtgttctcacctccccctgaatcggta
accagcctgacagaagtcgagcctaaagtcaacatgatgggctggatcactcacggtctc
ggcttggccttgccccagcctgttataagaagcaaagaggattatggggttgtagcagaa
acggttacacaacatgctgtccactctaggccaaattccacagacctggtccttgaggat
gtcaacgcagaagatgtccaggatcaggaccagtacctggaccagaagaacatttctgag
catccgtcttcccctaaacgagcagatccggaagaccgatcggatccagaaaccttgagt
ccatcagcaccaacgtcatctctgaatcaggaagacgtcgagacacaaaccggacgatgg
acatccttcatcgagagcatcaagagagaagcggaggatatcgccatggcaactttggag
gaacggttgcgacaggagcgtttggagatggcgaggatggctgagaaggtggcaagacac
gcagcagaggtgactgtcagagagctggcaggagcccgagtgaccgtacacacaccaatc
ctggaggtggaggaagaggctgagccagagttgcaggagctgaaggacgaggagaaagaa
cccgaaattttacacagtaaaagcacagagtgtcaggaactatctccagtcgagaagttc
acccaggaggctgaaggcccggtagaagacccacaagaggcagaggaagaattagaagat
gaagatcgtgtagaagagccatctgcttctcctgaacctgttagaccagaagcctttcca
actgaagagccagaagaagaagaggaggaagaagaagagtctgatgactcatcagaggca
gaatcagagccagagccaatcactcggcagccgaggtcatgtgacggagccggtgtgaaa
cagaacgtcacccaggacaatcgcatgttaaatgaagagggaacttatgttccttccaga
tgtgatgcgctgaaggcctgcttcatgcgtattccatatgctccagtttgcctcgaccgt
ttcaatcagctgctgaaagagaacaatatcaccccacctcaagtgccctccgtacctaaa
ctgccctctcgactatcgcagatcacccaacacttcccccatttgcctaccagactcaac
cagctacctcaacaaatcacagaaattccccagcgtatttcccagcgtgtctccaagctt
cctgagcacttcccttccttcccccagaaacttcccactttccctgaaagattttcctgc
aggtttcccaacggacttcccaaacatcctgagaagctacctgattttgctcaacacttc
tccagcttgcctcagcgcttatccaatattccagatcacctaatcaaccttcctcaatac
ttgtccagcattcctcgtcagtgctacaccagtcttcaccgtctgagcagcgtcagacct
caaatgatgcctaaacctcagcagcagcagcaaagtctggacctggagctggaccatctg
gtccgccagtcccccattcacatctcccgtaccccgtccccttcctcacctggttctgtg
ctggatttgcccaatgtccccttctatccccgtctgccccccatcagcccatcccatacg
ttctcaggcctctccaaccccacctttaatgcagaggatgaagccacttccgccagacca
tcagctagctccagaatgagcgttcacccagccgtaaatgtggaagatatggactcagac
aatgagcaatgtgggagaacttcccaccacatgccccagatcatcaccccacaggacccc
aacctcaaaaccctcaccgtgcctggatcatccaaatcgagccgtttcagggaaagaaag
ccacaaactatttggacgaaaataaagaagctgtattcttcaggagacgaggaagatgag
gagctggagacggcagtcagggcctggccaagccaaagcagcatcaccagcgccgatgac
gcgctgaaggagcgtccatcatcgaccgcaagccaggccagcacaatggtgaacgaacgt
ctgcaagagctggtcaaactgttgaaagaaagaacagagcgtgccaaggagaaactcatc
gatcctgacgacttagatgacgagacatcgactgccactccggcagcacctccacctcct
ccacctgagcctcagaaggaaccagagccagttgatgagaatcagcttgctcctactgaa
caggaagatgaacaggaagcatatatcaaactgctgtgcttcaaggtgaagcctcagtcc
aaaatcggtcgcctgattcggtaccgcttcccagccagcatcgacccgttcaccaatcta
ggctacgtcctgtggctctttttagtcactttagcctggaactggaatgtctggatgatc
ccggtgcgctgggctttccgctatgatgttgagggctcactttacctctggttgctcgcc
gactacctgtgcgacaccatttacatcctggacgtcctgctcttccagccgcgcctgcag
tttatccgcggaggcgatatagtcagtgacaaaaaggaaatgagagcccattacatgaaa
gatctgcgatttaagctggacgtggtcagcctttttcccctggagttcttctacttctta
gatggagtaaaacctcttctccgctgcccacggatactaaagattttgtctttctttgag
tttaacacgcgtctggaaggcattttgaccaaagcctatgtctacagagtgattcgtacc
accagctaccttctgtactcgctccacgttaacgcctgtctctattactggatgtcgact
gtgcaaggcctcaattctaccgcctgggtgtacgatggaaagggcaacgaatacatccga
tgtttctactttgccgtaaagactctgatcactatcggtggactgccggaaccgaccgta
ctaggagagtatatatttcagctcgtcaactacttcactggcgtattcgccttctccatc
atgatcggacagatgagagacgtggtgggagctgcgacggctgatcagacgcattaccgc
tcgtgtatggacagcacagtgaagtacatgggctcgaaccgcatccccaaagacgtgcag
caccgtgtgaagacctggtacaactatacgtggcagtctcagggcatgctggatgaagag
gagctgcttgtgcagttgccagacaagatgaggctcgacatagcagtggacgtgaattac
tcgattgtcagcaaagtgccactgtttgagggctgcgacaggcagatgatctacgacatg
ctgaaaaggctcagatcagtcgtgtaccttcccggagactacgtctgcaaaaagggtgaa
gtaggtcgagagatgtacatcataaagtcaggagaggttcaggtggttggtggtccagac
ggaaagactgtatttgtgactctaaaagcaggatctgtgtttggtgaaatcagcttgtta
tcggtaggaggcggaaaccggagaaccgccaacgtcatagcgcatggctttgctaatctc
ttcattttggacaagaagggcctcaacgaaatcctggtgcactatcccgagtcccagaaa
ctgctccgcaggaaagcaaagaagatgctggcagataagaagccagagaaaaagacggag
gaggagaaggagccggtgcgggtgattccgccgcgagcagaaacgcctaaactgttaaag
gcagcgatggaaatgactgagaaatcaggccttcgaggaacactggccaagctgaaggga
aaaaagaataacaagtctagtgtttcactgcagccgtccatatgttcctctgtgcttcct
ggctctccgatcatgaggcagcactcagagcaagaagctgacattctctctcagatctcc
gacagcaccatacacggaccccccatcagcccgtccggcctcggagatgaaagacgctca
gcgctcgaaggaccggcgctaaccgagaggacgatagaggggaaggacaagacagacgac
gagtaa
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