Tachysurus vachellii: 132864104
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Entry
132864104 CDS
T09596
Symbol
lmx1al
Name
(RefSeq) LIM homeobox transcription factor 1-alpha
KO
K09371
LIM homeobox transcription factor 1
Organism
tvc
Tachysurus vachellii
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tvc03000
]
132864104 (lmx1al)
Transcription factors [BR:
tvc03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
132864104 (lmx1al)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
M_domain
Motif
Other DBs
NCBI-GeneID:
132864104
NCBI-ProteinID:
XP_060753334
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Position
21:complement(15373078..15403002)
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AA seq
406 aa
AA seq
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MLPIETSGGVCFTVSQHSEGPNGMKTEENQSCLQQAPSSTPFEHVGGGEVCAGCESPIAD
RFLLRVNDQSWHETCVKCAVCLSTLSGTCYSRDRLLYCKHDYEKLFVRKCSACLQVIGRS
ELIMRVLGQVYHLGCFSCCECERRLQRGDEFVLKEGQLLCRGDYEKEREMLAAISPAPTE
SVKSEDEEGGSSTMGGKAGEDSKEHKRSKRPRTILTTQQRRAFKASFEVSSKPCRKVRET
LAAETGLTVRVVQVWFQNQRAKMKKIARRQQQQQQQQQEQEQIGGSRRGPSRGGRLSNDD
SEDGSSSHGLDGMLSYSSLPRQQLLALDPNLYGGEQFRHGLTPPQLGPEQMHPYDSEAVF
HDLDSDGSLGHLGDCLLATAEGGVLAGRVGNPIDRLYSMQNSYFTS
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgttacctatagaaacctcgggaggagtgtgtttcaccgtcagtcagcactcagaaggc
ccgaacggtatgaaaacagaggaaaaccagtcatgtctgcagcaggctccgtcttccaca
ccttttgagcatgtgggcggaggtgaggtgtgtgcagggtgcgagtcgcccatcgccgac
cgcttcctactgcgtgtgaatgatcagtcgtggcacgagacgtgtgtgaagtgtgctgtg
tgtctgagcacgctcagtgggacgtgttactcccgggaccggctgctctactgcaaacac
gactacgagaagttgtttgtgcggaaatgcagcgcatgcctgcaggtgattggtcgctcg
gagctgatcatgcgcgtgctggggcaggtgtatcacctgggctgcttcagctgctgcgag
tgcgagcgccggctccagagaggtgatgagtttgtgctgaaggaaggtcagctgctgtgc
cgtggagattatgagaaggagagagagatgctcgctgctatcagccccgcccccaccgag
tcagtgaagagcgaggatgaggaaggtggaagcagcaccatgggaggaaaagctggagag
gacagtaaagagcacaagagatccaagcggccgcgcactatcttaaccacgcagcagcgt
cgcgccttcaaggcgtccttcgaggtgtcctccaaaccctgcagaaaggtgagagagacc
ttagcagctgaaactggcctcacggtcagagtcgtccaggtctggttccaaaaccagaga
gcgaagatgaagaaaatcgctcgcaggcagcagcaacagcaacagcagcagcaggagcag
gagcagatcggcgggagcaggaggggtccgagcagaggaggacgactgagtaacgacgac
agcgaggacggttcgagcagtcacgggttagatggcatgctctcgtactcctccttgcca
cgacagcagctcctggctctcgatccaaacctgtacgggggtgagcagttccggcacgga
ctcacgccaccacagctaggccctgagcagatgcacccgtacgattcggaagccgttttc
cacgacttggacagcgatggaagccttggtcacctcggcgattgtctcttggcgacagca
gagggaggggtgctggctggacgcgtgggaaatcccattgaccgcctgtattcgatgcag
aactcctacttcacctcgtga
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