Trichosurus vulpecula (common brushtail): 118856870
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Entry
118856870 CDS
T10126
Symbol
TTC37
Name
(RefSeq) tetratricopeptide repeat protein 37 isoform X1
KO
K12600
superkiller protein 3
Organism
tvp Trichosurus vulpecula (common brushtail)
Pathway
tvp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
118856870 (TTC37)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tvp03019
]
118856870 (TTC37)
Messenger RNA biogenesis [BR:
tvp03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
118856870 (TTC37)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_16
TPR_19
TPR_14
TPR_12
TPR_17
TPR_CcmH_CycH
TPR_8
TPR_11
ANAPC3
ARM_TT21_C
TPR_9
TPR_15
Fis1_TPR_C
TPR_20
ARM_TT21_2nd
BTAD
TPR_30
PknG_TPR
DUF7017
Retrotran_gag_2
Motif
Other DBs
NCBI-GeneID:
118856870
NCBI-ProteinID:
XP_036623298
LinkDB
All DBs
Position
1:complement(467547332..467669345)
Genome browser
AA seq
1574 aa
AA seq
DB search
MIVVQRMSNKQVKTALKSARDAIRNKEYKEALKHCKTVLKQEKNNYNAWVFIGVAAAELE
QPDQAQGAYKKAAELEPDQLLAWQGLASLYEKSNYADAKDDLITVYQKLLDLYESADKQK
WCDVCKKLVDLYHQEKKYLEVAQTWHRLIKTRKEGGAEDQEVHQLWLKLTQFLAESTEEE
NEEIQQLLFTAFENALSSSDNIPSEDHETLYRRFIQCLSKFPHEISRMKKACEGMMNIYP
SVSYPLEMLCLHLIQSGSFTDEALQYCYQLVEKNSESGPGLIGLGIKALQDKKYEDAAKN
LTEGLKSSSVCIVGWYHLAETQVKMHRYKEAILSCNQALKTIENFSAPGRSLHQKNLCLR
LKAEALIKLSDHDSSEEAIATVDQVSDANNIPELLVLKGLAYLNKGLTDKTSKIVEELLS
SHPNLAAVHALEALIHFTRKDYPEAEKGFQRALDREAEVADYYYYLGLTYWFMSEDTRKD
KTKALTQFLKAAKLDTYMGEVFRYLGHYYREVVGDKSRARGCYRKAFELDETDEESGAAA
ADLSVELEDMDTALIILTTVTEKASAGTAKWAWLRRGLYYLKAGQHSQAVADLQAALRAD
PKDFNCWESLGEAYLSRGGYTTALKSFTKASELNPESIYSVFKVAAIQQVLGKYKEAVAQ
YQQIIKKKEDYVPALKGLGECHLMMAKGMLTDYLDGKAVDHIEQALDYFTWALQYRSDVS
CIWKLIGDACTSLHAVSPSKVNVNVLGVLLGQKEGKQILKKHELLHLGGRCYGRALKLMP
TANTWCDLGINYYRQAQDLVETGSCVNELKELLEKSLHCLKKAVRLDSNNHLYWNALGVV
ACHSGIGNYALAQHCFIKSIQAEQINAIAWTNLGVLYLANENIEQAHEAFKVAQSLDPSY
LMCWIGQALIAETVGSYDTMDLFRHTTELSMHTEGAIGYAYWVCTTLQDRTNRETELYRY
NILQMNAIPAAQVVLSKYTERIQNYAPAFTMLGYLNEYLQLKKEAADAYQRAILLLQNEE
NQEIYNVTVRNYGRLLCAIGEYDKAIQAFKSTPLEEFDDIIGLALALFKKGLFQESSKAY
ERALSIVESEQDKAHILTALAITEYKQNKMDIAKTLLFKCSILKEPTTESLQALCALGLA
MKDATLSKAALNELLKHVKQKDDNYQRCLITSAVYSLQGRNVSVQRQVSKAVHSNPADPA
LWSLLSRVVLQYTPRNAQGGAVAGNVAHILDSNHGKKALLYTAVNQLAMGSNSAEDEKND
PLKTIQKAVLLSPDDPAVWAGLMAACYADNTLAVLNNTQPKRTELDIALLTTVSATVKEK
DLPESYGQTIEKWSLCQALAGLIEKGKISEAEALCTKHLKSSPDQPAVFLLLRQIQCKPL
LQAQKHLPDAVLEELQKTVVSNSTSFSAWQWLAQVYQAQGMMGAAEMCYRKSLQVASQQG
NWNGKLSSLLRLALLALEVCRADISNDHWPSLVQEATAEALKLCFCPLALLLQALLQFHR
KMGARETRRLLERVVYKPGYPKSIVSVARWYLLRHLYAKDDYELIDMLVDNAKVHGDTRA
LELNQKLSSSSSSK
NT seq
4725 nt
NT seq
+upstream
nt +downstream
nt
atgatagtggtccaaaggatgtcaaacaagcaggtgaagacagcattgaaaagtgccaga
gatgcaataagaaacaaagaatataaggaagctttaaaacattgtaagactgtattgaag
caagagaagaacaactacaatgcctgggtttttattggagtggcagcagctgaactggaa
cagcctgatcaagcacagggggcctacaagaaagcagctgaactagaaccagaccagtta
ttggcctggcaggggttagcaagtttatatgagaaatctaactatgcagatgccaaagat
gacttgatcactgtctaccaaaagcttttggatctctatgaaagtgctgacaagcagaag
tggtgtgatgtctgtaagaagcttgtggatctttatcaccaagaaaagaaatacctggag
gtggctcaaacatggcacagactgatcaaaacaagaaaggaaggtggtgcagaggatcaa
gaggtccaccagctgtggctaaagttaactcagttcctggctgagagtactgaagaagaa
aacgaggaaattcagcaactgcttttcactgcatttgaaaatgctttgagttcttcagat
aacattcctagtgaagatcatgaaacactttatagacgcttcattcagtgtttatctaaa
tttcctcatgagatttctaggatgaagaaagcatgtgaaggcatgatgaacatctatcct
agtgtgtcttatccattggaaatgctttgcttacatttaattcagtcaggaagtttcact
gatgaagccctgcagtactgttaccaactggtggagaagaactcagaaagtggtcctggc
ctcattggcttaggcataaaagcactacaagacaaaaaatatgaagatgctgccaaaaac
ttaacagaaggattaaaatcaagcagtgtctgcatagtaggatggtatcatctggcagag
acccaagtgaaaatgcatcgctataaagaagctatactttcctgcaatcaagctctgaag
acaatagaaaacttcagtgcacctggtagaagtcttcatcagaagaacctctgccttcgt
ttgaaagcagaggccttaataaagctttcagatcatgactcttcagaagaagcaattgcc
actgtagatcaggtctcagatgcaaataatattccagagcttttagttctcaaaggtctt
gcttatctaaacaaaggcttaactgataaaacttcaaagattgtggaagaactcctttcc
tctcaccctaacctagctgcagtccatgccctggaggcactgattcattttaccagaaag
gactacccagaggcagagaaaggatttcagagagctcttgacagagaagctgaggttgct
gattattattactatcttggactaacatattggttcatgagtgaagatacaagaaaagac
aaaacgaaagctcttacccagtttttgaaggctgcaaaattggacacgtacatgggtgag
gttttccgctacttaggacattattacagagaggtcgttggagataagagcagagcccgg
gggtgttacagaaaagcttttgaactggatgaaacagatgaagaatctggagctgctgca
gctgacttaagtgtggagcttgaggatatggacactgctttgattatcttaacaacagta
actgaaaaggcaagtgctgggacagccaaatgggcctggcttagaagagggctctactat
ttgaaagctggtcagcattctcaagcagtggctgatttacaggcagcattaagagcagac
ccaaaggacttcaactgctgggagtcattgggagaggcctacttgagtagaggtggctat
accacagctctgaaatccttcacaaaagccagtgaattgaacccagaatctatctacagt
gtgtttaaggttgcagcaatacagcaggtcctaggcaaatacaaagaggctgtagctcag
tatcaacagatcataaaaaagaaagaagattatgtacctgctctgaaaggtcttggtgag
tgtcaccttatgatggcaaaaggaatgctgactgattaccttgatgggaaagctgtggac
cacatcgaacaagccttggattactttacttgggctctccagtatcgatctgatgtttct
tgtatttggaagctcattggagatgcatgtaccagtttacatgcagtttcaccatctaaa
gtgaacgtgaatgttctgggagtccttctgggtcagaaagaagggaaacaaatattgaag
aaacatgagcttctccatctagggggaaggtgctatggccgagcattaaaactgatgcct
acagctaatacgtggtgtgatcttggaattaattattatcgtcaagcacaggatctagtg
gaaacaggaagctgtgtgaatgaacttaaagagttattggagaaatctttacattgtctg
aaaaaggcagtgagactggatagtaataaccatttgtattggaatgcccttggtgtggtt
gcttgtcacagtggcattggaaactatgctcttgctcaacactgtttcatcaaatcaatc
caggctgaacaaattaatgctattgcatggacaaacttgggagttttatatctagcaaat
gaaaatatcgagcaagctcatgaagccttcaaggttgctcagtcgcttgatccatcttac
ttaatgtgttggattgggcaggcccttattgcagagacagttggaagttatgacacaatg
gatctctttcggcatactactgaactcagtatgcatacagagggagcaataggttatgca
tattgggtctgtacaacattgcaagataggacaaacagagaaacggagctgtatcgctat
aatatcctccagatgaatgccattccagcagcacaagttgttttgagcaagtatacagaa
agaattcagaattatgctccagcttttacaatgttgggttatttaaatgaatatctacaa
ctgaagaaagaggcagctgatgcataccaaagggcaattttattactacagaatgaagaa
aatcaagaaatctataatgttacagtaagaaattatggccgcttgttatgtgctattggt
gaatatgataaagccatccaggcttttaagtcaacccctctggaagaattcgatgacatc
ataggtcttgcactggctttattcaagaaaggacttttccaagagagcagcaaagcctat
gagagagccttgtccattgttgaatcagagcaggacaaagctcatatcctgacggccctg
gcaataacagaatacaaacaaaataaaatggacatagccaagacattactattcaaatgt
tctatcttaaaggaaccaaccaccgaaagtcttcaagcactctgtgctctggggctggca
atgaaggatgccactctctcaaaagcagcacttaatgagttattaaagcatgtaaaacag
aaagatgataattatcagaggtgtcttattacatcagctgtttattcattacaaggtcga
aatgtgtcagtgcagagacaagtgtcaaaagctgtccacagtaacccagcagaccctgcc
ctttggtctctcttatcccgagtggtacttcagtatactccacgaaatgcccaaggtgga
gctgtagcaggaaatgtggctcatatacttgattcaaatcatggaaagaaggccttactg
tatactgcagtcaatcagttggcaatgggaagcaattcagcagaagatgaaaaaaatgat
ccgctgaagaccattcagaaggcagtcctgttatctccagatgatcctgctgtctgggca
gggctaatggcagcctgttatgctgacaatacattggctgtcttaaataacacacagcca
aagaggacagagctagatatagcactgttaaccactgtttctgctacagtcaaagaaaaa
gaccttcctgaaagctatggtcagactattgaaaagtggtctctttgtcaagctctcgcc
ggtttaatagaaaaagggaaaatttcagaagctgaggccctctgcacaaagcatttaaaa
agtagtcctgaccaaccagctgtcttcctgcttttaaggcaaattcaatgcaaacctctg
ctccaggcacagaaacatcttccagatgctgtcctggaagagctgcaaaaaacagttgtg
tccaattcaacatctttttcagcttggcagtggttagcacaggtataccaggctcaggga
atgatgggtgctgcagagatgtgctacagaaagagtctccaggtggcatcccagcagggt
aattggaatggaaaactctcaagtttactgagactggcattacttgccctggaagtctgc
agggctgatatttcaaatgatcactggccatctttggttcaggaagctacagctgaagca
ctgaaactttgcttttgcccgctggctcttctgttgcaagctttgttacagtttcatcgc
aaaatgggagcaagggagacacggcggctattggagagagtagtgtataagcctgggtat
cccaaatccatcgtatcagttgcacgctggtacctcctgaggcatttgtatgccaaagat
gattatgaactaattgatatgcttgtagacaatgccaaagttcatggagataccagagca
ctagaactgaatcagaaattgtcatcatcgtcatcatcaaaatga
DBGET
integrated database retrieval system
