Tripterygium wilfordii (thunder duke vine): 119983100
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Entry
119983100 CDS
T07256
Name
(RefSeq) UV-stimulated scaffold protein A homolog
KO
K23720
UV-stimulated scaffold protein A
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
119983100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
twl03400
]
119983100
DNA repair and recombination proteins [BR:
twl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
119983100
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UVSSA_N
DUF2043
VHS
AnfO_nitrog
DUF5669
Motif
Other DBs
NCBI-GeneID:
119983100
NCBI-ProteinID:
XP_038682696
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Position
17:13465028..13469455
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AA seq
651 aa
AA seq
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MEDDDERGKVRALIDKATNSTAREVDPRLLRAIKSVVRYSDSELRLAAQTLLDLMKRDHS
QVRYLTLLVIDELFMRSKLFRTIVVENFDQLLSLSVGFRRNLPLPAPPAIAVLLRSKAIE
FLEKWNISFGIHYRQIRLGFDYLKNILKFQFPNLQANAARIQQERREREIRSKEIILNKF
ESLRTNLFAIKEEIQSTIDEIEECLDIVCLEEESIPADLLDDEDFEEFHSSELYQIRLDS
LKEGKKVHEDSDNKVVFDALRELYKLLVTKHLVSIQEWISVLIRVEVADNRFRDSTLKEF
IDIRNHLQSVKKQCEESGCYVPRTAKHDKEGKEEEDIWEEGKIGSVENEGTSIANKLAEA
PVLTSTSGKVSDDTPECRNKSSDGNESIGREGRTDAHPFRNKLLAEAPVLKWNSSLDTWG
SNRDVLANQRGLELESHWGRVDYDAVIPADKIAELSVQATLYEEEHVEIQPCRAPLSKRG
LCQRRDLRVCPLHGTIVPRDDEGKPIHQKSMTDVGTSIDLGTNMVQQLAKQAVKTVRDRD
NEEARKRKIDKQSLKRAKLAKIRGHNEAVLRDAAMASASISAAVGEDAVGNSVDRLPNRN
KETLASMLRKKVTTKDRLAQRLLNARASNATIRQLTLGEDANYKEAFPNQW
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atggaagatgatgatgagagagggaaggtgagggctttgattgacaaggccaccaactcc
acggcccgagaggtcgacccccgcctcctcagggccattaaatcggtggttcgatactcc
gattcggagctccgactcgctgcccaaaccctcttggacctcatgaaacgcgaccactct
caggtccgttaccttacacttctcgtaatagatgaactatttatgcggtcaaagctcttc
agaaccattgttgttgaaaactttgatcagttactgagtctgagtgttggattccgaaga
aatttgccacttcctgctccacctgccattgctgttcttttacgttcaaaagctattgag
ttcctggagaagtggaacatttcatttgggattcattatagacagatcagattaggtttc
gactatcttaaaaacattctcaaattccagtttcctaatcttcaggcaaatgcagcaagg
attcaacaagagagaagggaaagggagatacggtcaaaagaaattatactgaataagttt
gaatctctgaggactaatctctttgcaataaaggaagaaatacaatctactatagatgaa
attgaggagtgtttggatattgtttgtcttgaagaagagagtataccggctgatctgtta
gatgatgaagattttgaagagtttcattcttctgagttgtaccaaatacgtcttgattca
ttgaaagaaggaaaaaaggtccatgaagatagcgacaataaagtggtctttgatgcactg
agggagttgtataagcttctggtgacaaaacatctggtttcaatccaagaatggatttct
gtgcttataagggttgaagtggcagacaataggtttagagattccacactgaaagagttt
atagatatccgaaatcatctacagtcggtgaagaaacaatgtgaagaatcgggttgttat
gttccaagaactgcaaagcatgataaagaagggaaagaagaagaagatatctgggaggag
ggtaagattggatcagtggagaatgagggcacgagcatagccaataaactcgctgaggct
cctgtgcttacatcgacttctggtaaggtgagtgatgatacccctgaatgcaggaacaaa
agttctgatggcaatgagtccataggtcgtgaaggtagaactgacgctcacccctttaga
aataagcttttggctgaagctcctgtgctgaagtggaattcatctttggatacttggggg
tcaaacagggatgttttggctaaccaaagagggttggagcttgaaagtcactggggtagg
gtagactatgatgcggttattccagcagataaaattgcagaattgagtgttcaggcgact
ctttacgaggaggagcatgtagaaatccaaccatgtcgtgctccattgagcaaaagaggt
ctctgccagagaagagatttgagagtttgcccacttcatggtaccattgttccccgagat
gatgaaggaaaacctatccatcagaaatcaatgacagacgttggaaccagtattgatcta
gggactaatatggttcagcagttggcaaaacaagctgtgaagactgttcgggacagagat
aatgaggaagcaaggaagagaaaaattgataaacaatcgctcaagcgtgcaaagctagca
aagattcgggggcacaatgaagcggttctacgggatgctgcaatggcttcagcttctata
tctgcagctgttggagaagatgcagtgggaaacagtgtggatagattgccaaacaggaac
aaggagactcttgcatccatgttgcgtaagaaagtcactacaaaagatagattagctcaa
agacttttgaatgcacgggctagtaatgcaacaataagacagctaactctaggtgaagat
gcaaattacaaagaagccttcccaaatcaatggtaa
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