Tripterygium wilfordii (thunder duke vine): 119995271
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Entry
119995271 CDS
T07256
Name
(RefSeq) nuclear pore complex protein NUP93A
KO
K14309
nuclear pore complex protein Nup93
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119995271
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
twl03019
]
119995271
Messenger RNA biogenesis [BR:
twl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
119995271
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
TPR_14
HTH_RNase_II
TPR_2
Motif
Other DBs
NCBI-GeneID:
119995271
NCBI-ProteinID:
XP_038697660
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Position
3:complement(9037444..9047270)
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AA seq
861 aa
AA seq
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MASERNWTDLLHSSTKLLEQAAPSAQFPPLQRNLDQLEALSKKLKARTLRTEAPSQSIAA
TRLLAREGLNAEQLARDLKSFELKTTFDDVFPAEATTVEEYLQQVHEMAIVSAIQEAQKD
NIKSFNDHMMKVMEEDWQKEKRDFLQSLSRIATLPRTNMTDASAVGTLPGQVASVASSHQ
VSSGPSGMEIVPLANNKPIIEKKASAYGEVVKNLNNSRERGLPFKPATAFKSAYETLGPE
ASGGKSVNMQKIWHLIQTLIGEDSTIQRGVSRKMSLIIGARRHLEWGHEKYIMDTIQSHP
AQAALGGAVGNLQRVRAFLRIRLRDYGVLDFDAGDARRQPPVDTTWQQIYFCLRTGYYEE
ARNVALSSRASQQFAHLLTEWINTGGMVPAEIGAAASEECEKMLRMGDRVGRASYDKKKL
LLYAIISGSRRHIDRLLRDSPTLFNTIEDFLWFKLSAVRDYPSGASSSVVLNDLVPYSLD
DLQVYLNKFEPSYYTKNGKDPLVYPYVLLLSIQLLPAILHLSKEARDEGYDIDAAHISIV
LADHGVLSEGSGAGQKVGVMDAYAEVSSIIRQYGSAYLRHGNLSMALEYYAQAAAAVGGG
HLSWVGRGNVDQQRQRNSMLMQLLTELLLRDGGIYLLLGPRGTGEEGELGRFLTDYRERQ
QFLLEAARQCEEAGLYDKSIEIQKRIGAFSLALNTINKCLSEAICALSRGRLDGESRMAG
LIHSGNEILETYKYYPEVSPQERENVMEQQTVLRQLEAILTVHKLARIGNHVDALREVAK
LPFLPLDPRAPNVNADVLQNLSPYVQACVPDLLKVALTCLDTVADSDGSLRSMRAKIAQF
LANNMNMNWPRDLYEKVARSL
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtgagcgtaactggaccgatctgctccactcttccacaaagcttctagaacaa
gctgctccttctgctcagttccctcctctccagaggaacttagatcagttggaagcattg
tccaagaagcttaaggctagaacattgagaacagaggcgccttctcagtctattgctgca
acaaggcttcttgctcgtgaagggttaaatgctgagcagcttgcaagggatctaaagtca
tttgaattgaagactacttttgatgatgttttccctgctgaggcgacaaccgttgaagag
tatctgcaacaggttcatgaaatggcaattgtgtcagccatccaagaagctcagaaggat
aacatcaaaagttttaatgatcatatgatgaaagttatggaggaggattggcaaaaggaa
aaacgtgactttcttcaaagcttgagccggattgcgacgttacccaggacgaatatgact
gatgcgagtgctgtgggtactcttcctggtcaagtagcatctgtggcttcaagccatcaa
gtttcttcaggtccctctggaatggagattgttcctcttgctaataacaagccaattatc
gagaaaaaagcttcagcatatggtgaagtagtgaagaatcttaataactctagggagcgt
ggtttaccattcaagcctgctacagctttcaagagtgcatatgaaactttgggcccagaa
gcatctggtggaaaatccgttaatatgcagaagatatggcacctcattcagacattgatt
ggtgaggattcaactatacaaaggggtgtttcaaggaaaatgtcactaataatcggtgcc
aggcgccaccttgagtggggacatgagaaatatattatggatacaatacaaagtcatcct
gcacaggctgcccttggtggtgctgttggaaatttacaaagagttcgcgcgtttcttcgg
atacgtttaagagattatggtgttttagattttgatgctggcgatgctcgcaggcagcct
ccagttgacactacttggcagcagatttacttttgcttgagaactgggtattatgaagaa
gccagaaatgttgcactatcatcccgtgcatcacagcagtttgctcatctgctcacagag
tggattaacactggaggtatggtacctgcggagattggagctgcagcttctgaagaatgt
gagaaaatgttgagaatgggagatcgtgtgggtcgagcatcatacgacaagaaaaaactg
ttactttatgctataatatccggttctcgaaggcatattgatcgccttctaagagattcg
cctacgcttttcaatactatagaggatttcctatggttcaaattgtctgctgtaagggac
tatccaagtggagcatcgtcatctgtggtcttgaatgacctggtgccatacagtctggat
gatttgcaggtctacttaaataaatttgagccatcatattacacgaaaaatggaaaggat
cctctggtatacccatatgtcttgcttttaagtattcagttgcttccggctattctacat
ctgtctaaggaagctagagatgaaggatatgacattgatgcggcccacatatcaattgtt
cttgccgatcatggggttctttctgaaggttctggggctggacaaaaggtaggggtgatg
gatgcttatgcagaggtatctagtattataaggcagtatggctctgcataccttcgtcat
ggaaatctctcaatggcattagaatattatgcgcaagctgctgctgctgtgggtggtggc
catttgtcttgggttgggagaggtaatgtggatcagcaaaggcagagaaattcgatgctg
atgcaacttcttactgagttgttgttacgggatggtggaatttatctcttacttggacca
agaggtactggagaggaaggggagttgggacgctttttgactgattatagagaaagacaa
caatttctgcttgaagctgcccggcaatgcgaggaagctggcctctatgacaaatctata
gagattcagaagaggattggagcattttcattggcactaaatacgattaataaatgtctc
tctgaagcaatttgtgctctctcaagaggtagattggatggtgagagtcgtatggctggc
ctcattcattccggaaatgagattttggagacatacaaatattatcctgaagtcagtcct
caggagagagagaatgttatggagcaacaaactgtgttgagacagcttgaggctatattg
actgtccacaagttagcgaggatagggaatcatgtagatgctctaagggaggttgccaag
cttccttttcttcccttagatccacgagcgccaaatgtcaatgccgatgtccttcagaat
ttatctccttatgtccaagcctgcgtgccagatctcctgaaggttgctcttacttgtctg
gacactgtagcagattctgatggatctctgcgttccatgagggcaaagattgcgcaattc
cttgcaaacaacatgaacatgaattggcctcgtgatttgtacgaaaaggttgctcgaagt
ttgtga
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