Tripterygium wilfordii (thunder duke vine): 120001340
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Entry
120001340 CDS
T07256
Name
(RefSeq) autophagy-related protein 2-like isoform X1
KO
K17906
autophagy-related protein 2
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
120001340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
twl04131
]
120001340
03029 Mitochondrial biogenesis [BR:
twl03029
]
120001340
Membrane trafficking [BR:
twl04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
120001340
Mitochondrial biogenesis [BR:
twl03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
120001340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG2-VPS13_C
Chorein_N
ATG2_CAD
Atg2_N
Motif
Other DBs
NCBI-GeneID:
120001340
NCBI-ProteinID:
XP_038705538
LinkDB
All DBs
Position
7:complement(14671885..14685314)
Genome browser
AA seq
1992 aa
AA seq
DB search
MFSWNIAKSAAEAIISRWAVKRLCKFLLKKKLGKFILGDVDLDQLEVQLIDGTIQLNDLA
LNVDYINKKLGSAASVIIKEGSIGSLVVNMPWKGKGCQVEVDELELIVAPCPGVDSTAGD
ETCSSQDDKQYMHCTSGKFGHEMADNMAKSALSDVHEGVKTIAKIVKWFLTSFNVKINKL
IIAFDPYLEKDDKEVECERMLVLRIMEIECGTGVSEDDESKLGSFLGISQLTNFLKFRGA
IIELLHMDKVNDQTCCSCASGATFGSLFLCSCSSNIATSVLIGEKGGFSGSLRLSIPWKN
GSLDIRKVDADIYVDPIELRFQPSTIKWFLLSWEIYRSLGKGARGPNHTTLIESDFLNGD
SHVSSTLISSAIIPDNMIPIRGSVPSNFSCVAQKQTSFEDMLPGSHFIHDWVPFPASESE
KDSIGGELDLAASVDQFFECFDGLTNSQSALGGSGMWNWTCSVFSAITAASSLASGSLHI
PSDQQHVQTNLKATFAGLCITLLFDDEDHKLLCDKKGNQMNNCPNLHYMGAECRDIHVGL
QVCPQEMRVEGTIKCIEVSDYLCNKNDVTKSSLDGCVHDFQSQTHLIQNLQAKVQGSLPP
VVLFAEDSSSEKLSGLVAADFPFGNKGGITKVMLLKTSGFTHYRFNMNLNPSDGNLRCPA
TFSLELPPFIFWVNFWLINALLNLLKEVAKCVDVKDENNKFPVEPSGEKHRSTQDTEKGG
PCPGVKASSSIESLRGEISLLNSRIILCFPFESPNHLASYSSWDQYIALDFRSLSTVKKG
TIEDNSSISGAISQKKFTPRATQSLHLIISSLDVYLVTSACSGNAGIDSCDVGSLKFCAE
HVISTTSRAGSFSVISMLWRDSPITGPWIVERAKSLATSDECISTEKFMGKGYEFATVTP
VKDMEGKHAQIRNEIVSSSAFLLHIHLFSMRINLGAAQYNGLNRLLDQMVNASKCFACDS
TSTNTEISVSQTAILVECDSVEITIRPDIKKNVKSSLQNELPGSWHHLKLKIQKLSLLSV
TNIGAIRGATFFWLAHGKGNLWGSITEVPDQEFLLISCSNSTMKRGDGGGSNALSSSLAG
SDILHLWEPENCNIFTSVTVRCVLFVAVGGRLDWFYSISSFFILPSPEVEDSDGNSSQKC
ESSAHNESSFVLKLVDVGLSYEPYLKKLVIRGDLSSSSFKEEMDDPVGCLLAASLLTISN
TTFSDSINNDYMVRVQDLGLLIGAMSESTNIDGNYSMGHLRRIGYIRVAREALIEVIFRT
NSKNGLLWEIECSKSHIYLETCHDTTSGLLCLVAQLQQLFAPDVEESLVHLQSRWNNFQQ
VEETNEYNDESRILNRDVAPSVSLMHTSTVDFEGRSGVCGLMDEICENAFHFDHVNESCD
IDFSESQGRASLDENLLGEACSLTGTPEISCDGLSFNESMPLIGLESNGASFLEEGYIPE
VMEGYCLSELRSLSELSVGRQSFPEVLICRSRSLGDGDAGIRNGGWYGDSSLKIVENHIS
DTNGEARLKDFLDDKYRPDDCTKHADSKEATGRVLFNNVNVIWRMYAGSDWHESRKNKGS
SVHLHGRDTTACLELTLSGMRIQYDTFPGGGTCVSKLSLSVQDFYLSDMSKAAPWKLVLG
YYNSKDHPRESSSKAFKLELEAVRPDPIIPLEEYRLCIAFLPLLLHLHQSQLDFLINFFA
KSSSFDQSLDSHQDAGGSKISATSGGHAIPDEALLPFFQKFDIYPILVRVDYRPSHVDLA
ALRGGKYVELVNLIPWKGIELQLKHVHAVGLYGWGSICETIIGDWLEDISQNQVHKVLQG
IPTVRSLVAVGAGASKLVSLPVENYRKDRRVLKGMQRGTIAFLRSISLEAVGLGVHLAAG
AHEILLLAECILTSIPPSVSWPAQDKRKTNVRCNQPKNAQQGIHLAYESLNDGLEKSASA
LVRTPLKRYQRGASAGSAFATAVRGVPAAAIAPASACASAVRYALLGLRNSLDPEHKKES
LEKYLGPSHLRE
NT seq
5979 nt
NT seq
+upstream
nt +downstream
nt
atgttctcatggaacatcgccaagtcggcggcggaggcgattatctcgcggtgggcggtg
aagagactgtgcaagttcctgttgaagaagaaattggggaaatttattttgggcgacgtt
gatcttgaccagcttgaagtgcagctcattgatggcacgatccagctcaatgatcttgct
cttaatgttgattatatcaacaagaagcttggctcggcagcgtcagtgattataaaagaa
ggatcaattggctcacttgtagttaacatgccttggaagggtaaaggttgtcaagttgag
gtggatgagcttgagcttatagttgctccttgtccaggagtggattctacagccggggat
gaaacctgttccagtcaagatgataaacagtatatgcactgtacctcaggaaagtttggg
catgagatggctgacaatatggcaaagtctgctttgagtgatgttcatgaaggcgttaag
acaattgcaaagatagtaaaatggtttcttacaagtttcaacgtaaagataaataagctg
attatcgcatttgatccatatttggaaaaggatgacaaggaggtggagtgtgaaagaatg
ttggtgcttcggataatggaaatagaatgtggaactggcgtgtctgaagatgatgagtcc
aagttggggagcttccttggaataagtcaattgacaaactttctaaaatttcgaggagca
ataattgaacttctccatatggacaaagtcaatgatcaaacatgctgttcatgtgcatca
ggagcaacgtttggcagcctatttttatgttcctgctcatcaaatattgcgacttctgtt
ttgattggtgaaaaaggtggattttcaggcagtctaaggttaagtataccttggaagaat
ggttccttagacattcgcaaagtggatgcagatatatatgttgatcctatagagttacga
tttcaacccagcacaatcaagtggtttttgctttcatgggaaatttatagaagtttgggg
aaaggtgctaggggtcccaaccatacaacattgatagagtcagatttcttaaatggggat
tctcatgtttcatctaccctgatttcttctgcaattattcctgataatatgatcccgatt
cgtggtagtgttccttccaatttttcctgtgtggctcagaaacaaacatctttcgaagac
atgctacctgggtcacattttatacatgactgggttccatttcctgccagtgaaagcgag
aaagacagcattggtggagaacttgatcttgcggcgagcgtggaccagttttttgaatgt
tttgatggactaacaaattcacaatcagctctaggaggcagtgggatgtggaactggaca
tgttctgttttcagtgcaataactgcagcgtcaagcctcgcttctggatctttgcatatt
ccctcagatcagcagcatgtgcaaaccaatcttaaagctacttttgctgggctttgtata
acgcttttatttgatgatgaggatcataagcttctgtgcgacaagaagggtaatcagatg
aataattgtcccaatcttcattacatgggtgcagaatgcagggacattcatgttggtttg
caggtatgtcctcaagaaatgagagttgaaggcacaatcaaatgtattgaggtgtctgat
tacttatgcaataaaaatgatgtcacaaaatcttccttggacgggtgtgttcatgatttc
caatctcaaactcatttaattcaaaatttgcaagctaaagttcaaggttctctccctccg
gttgtcttgtttgctgaagattctagttcagaaaaattgagtggactagtagctgcagat
tttccgtttggtaataaggggggcatcaccaaagttatgttgcttaaaacttcaggcttt
actcattaccggtttaatatgaatttaaatccatctgatggaaatttaagatgccctgct
acgttttccttggaactaccaccattcattttctgggtgaacttctggttgatcaatgca
ctcttgaatcttctgaaggaagtggcaaaatgtgttgatgtgaaagatgaaaataacaaa
tttcctgttgagccatctggtgagaagcacagatcaactcaggacactgagaaaggaggt
ccttgtcctggtgtgaaagcttcgtcctccattgaaagtctgcgaggtgaaatatcactt
ctaaattcaagaataatactatgtttcccttttgagagccctaatcatcttgctagttac
tcgtcttgggatcagtatattgctttggatttccgttctctgtcaaccgtgaagaagggc
acgattgaagacaatagttcaatttctggtgcaatatcacaaaaaaagtttactccgagg
gcaacacaatctttgcatctgatcatcagtagtcttgatgtttacttggtcacatctgca
tgtagtggcaatgctggaattgattcatgtgatgtgggaagcttgaaattctgtgctgag
cacgtgatatccaccaccagcagagcaggctctttttctgtcattagcatgctttggcgg
gacagtcccatcactgggccttggatagtcgagagagctaagtcattggccacctcagat
gaatgcatctcaacagaaaaattcatgggaaagggttacgagtttgccactgtaacgcct
gttaaagatatggaaggaaaacatgctcaaatccgtaacgagattgtatccagctctgca
tttcttctgcatatacacctattttcaatgagaatcaatcttggtgctgctcagtataat
ggtttaaatcgtcttttagatcagatggtaaatgcatcaaaatgctttgcctgtgattca
accagtactaacacagaaatatcggtgtctcaaactgcgatccttgttgaatgtgattct
gtagaaattacaattagaccagatataaagaagaatgtgaaaagttctcttcagaatgag
ctgcctggatcttggcatcatctgaaactgaaaattcagaagttaagtctactgtctgtc
acaaatattggagctattaggggtgccactttcttttggctagcccatggaaaaggtaat
ttgtggggttccatcactgaggttccagatcaagagtttcttctgatctcttgtagcaac
tctacaatgaaacgtggtgatgggggaggttcaaatgcattatcttctagtttggctggt
tctgatattttacacctgtgggagccggagaactgcaatatcttcacatctgtaactgtg
agatgtgttttgtttgtagccgtaggtggtcgattggactggttctattcaatatcgtca
tttttcattttgccgtctcctgaagttgaagattctgatggcaatagttcacaaaagtgt
gaatcaagtgcacataatgagtcatcttttgttctaaagttggttgatgttggattaagt
tatgagccctacttgaagaagttggtaatcaggggtgatctgagttcttcatcttttaaa
gaagaaatggatgatcctgttggttgtttgttggctgcatcattgttgactatttcaaac
acaactttcagtgattcaataaacaatgattatatggttagagtgcaggatcttgggctt
ctaattggtgcaatgtcagagtctactaatattgatggcaattacagtatgggacatctt
cgcaggattggttacattagagttgctcgggaggcacttattgaagtaatttttagaacc
aactctaagaatggccttctgtgggagattgagtgttcaaaatctcatatttatttggaa
acctgtcatgacacaacctctggtctcctttgcttggttgctcaactccaacagcttttt
gcccctgatgtggaggaatcccttgtgcacttgcagagtcggtggaataattttcagcag
gtagaggagactaatgagtataatgatgaaagcagaattcttaatagagatgttgcgccc
tcagtatcactaatgcatacttcaactgtagattttgaggggagatctggagtgtgtggc
ttaatggatgagatttgtgaaaatgcctttcattttgatcatgtaaatgagagctgcgat
attgatttttctgaatcacaaggtcgtgcttcacttgatgaaaatctacttggtgaggct
tgcagcttaactggaactcctgagatttcctgtgatggtctatccttcaatgaatcaatg
cctctaatagggctggaaagtaatggagcctcatttctagaagaaggatacattccagaa
gtgatggaaggctattgtctttccgagctacgctctctatcagaattatctgtagggaga
caatcgtttccggaggttcttatatgcagatctaggagcttaggggatggagatgctggc
atacgaaatggtggatggtatggggattcctccttaaaaattgttgaaaaccacatatca
gacacgaatggggaagccaggttgaaagattttttggacgataagtatcgacccgatgac
tgcacaaaacatgctgattctaaagaggccacaggacgtgtacttttcaacaatgttaat
gtcatatggagaatgtatgctggctctgactggcatgaatctagaaagaacaaggggagc
tctgtccatcttcatggaagagatactactgcttgtctagagcttactttatctggaatg
cggattcagtatgacactttcccaggtggcggaacatgtgtatccaagctttctctttcc
gtccaagatttctacctttctgacatgagcaaagctgcgccttggaaactggtattagga
tattataattcaaaagatcatcctagggagtcctcttcaaaagcattcaagctagagttg
gaagctgtcagaccagaccctataataccactcgaggagtatcgattatgtatcgcattc
ttacctttgctattacatcttcatcaaagccaacttgatttcctcatcaacttttttgca
aaaagctcgtcgtttgaccagtctttagacagtcatcaagatgctggtggttcaaaaata
tctgcaactagtggagggcatgccatcccagatgaggcattgcttcctttttttcagaag
ttcgacatataccctattcttgttcgggtagactacagaccaagccatgttgatctagct
gcattaagaggcgggaagtatgtggaacttgtaaaccttattccctggaaggggattgaa
ttacaactcaaacacgttcatgctgttggcttatatggctggggcagcatatgtgaaaca
attataggggattggttggaagatatttctcaaaatcaggtacataaagtattgcaaggc
attcctaccgtccgttccttggttgctgttggtgctggtgcttcaaagttggtttctttg
ccagttgagaactacagaaaggatcgtagagtactgaagggtatgcaaagaggtacaatt
gcatttttaagaagtatttctcttgaagctgttggacttggggtacatctggcagccggt
gctcatgagattctgcttctagcagaatgtattcttaccagcattcctccttctgtatca
tggcctgcacaagataaaagaaagacaaacgtaagatgtaatcagccgaagaatgcccaa
cagggaatccacctggcttatgagagcctcaatgatggactggagaaatctgcttctgct
ttagttcgaactcccttgaaaaggtaccagcgtggggccagtgcaggatctgctttcgca
actgctgttcgtggggttcctgctgctgctatagctccagcttctgcttgtgctagtgca
gtacgttatgctcttcttggccttagaaatagtctggatcctgagcataagaaagagtca
ttggagaaatatttgggtcccagtcatctgcgcgaatag
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integrated database retrieval system
