Tripterygium wilfordii (thunder duke vine): 120005722
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Entry
120005722 CDS
T07256
Name
(RefSeq) U5 small nuclear ribonucleoprotein 40 kDa protein
KO
K12857
Prp8 binding protein
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120005722
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
twl03041
]
120005722
Spliceosome [BR:
twl03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
120005722
Complex C
U5 SnRNP specific factors
120005722
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
NBCH_WD40
ANAPC4_WD40
Nbas_N
Nup160
Motif
Other DBs
NCBI-GeneID:
120005722
NCBI-ProteinID:
XP_038711442
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All DBs
Position
9:10430859..10434338
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AA seq
347 aa
AA seq
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MQMQFVPRDSENALSVSGPRPMEWSTVPYSGSQAPGPNGKQRTSSLESPIMLLTGHQSAI
YTMKFNPAGTLIASGSHDREIFLWYVHGECKNFMVLKGHKNAILDLHWTTDGSQIVSASP
DKTVRAWDVETGKQIKKMAEHSSFVNSCHPSRRGPPLIVSGSDDGTAKLWDMRQRGAIQT
FPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVIMTLQGHQDMITGMSLSPDGSY
LLTNGMDSKLCIWDMRPYAPQNRCVKVFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMV
YVWDTTSRRILYKLPGHTGSVNESVFHPTDAIVGSCSSDKQIYLGEI
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatgcaatttgtaccaagagatagcgaaaatgctttgtccgtgtctggtccaagg
ccaatggaatggtctactgttccatatagtgggtcccaagcacctggaccaaatggaaag
cagcggacatcaagtttggaatcgcctataatgttgttgaccggtcatcagagtgctata
tacacaatgaagttcaatcctgctgggactcttattgcatctgggtctcatgacagagaa
attttcctatggtatgtgcatggggaatgcaaaaatttcatggtcctaaagggacacaag
aacgcaatattggatcttcactggactactgatggatcccagatagtatcagccagccct
gataaaactgtgagggcatgggatgttgagacaggcaaacaaattaaaaagatggcagag
cactcctcctttgtgaactcatgccatccttcccggagggggcctcctctcattgtcagt
gggtctgatgatggaactgcaaaactgtgggatatgcgtcagaggggtgccattcaaaca
ttcccagataaataccaaatcactgctgtcagcttttctgatgcgtcggataagatttat
acaggtggcattgacaatgatgttaaggtatgggacttgcgcaagggtgaggttatcatg
acacttcaaggccatcaggatatgattacaggtatgtcattgagtccggatggctcctat
ctactcacaaatggcatggacagcaagctctgcatctgggatatgcgcccgtatgcacca
cagaatcgctgtgtaaaggtgtttgaagggcaccaacacaactttgagaaaaacttgttg
aaatgtagctggtcaccagatggaagcaaggtcactgctggcagttcagatcggatggtt
tacgtatgggatacaacttctcgccgcatcttatacaagcttcctggccacactggatcg
gtgaatgagtctgtcttccatcctacggatgctattgttggatcttgtagcagcgacaaa
caaatatatcttggggagatctga
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