Tripterygium wilfordii (thunder duke vine): 120007268
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Entry
120007268 CDS
T07256
Name
(RefSeq) protein CHROMATIN REMODELING 25
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
120007268
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
twl03400
]
120007268
DNA repair and recombination proteins [BR:
twl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
120007268
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
SWI2_SNF2
AAA_22
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
120007268
NCBI-ProteinID:
XP_038713401
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All DBs
Position
2:1889637..1900265
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AA seq
932 aa
AA seq
DB search
MEDEEEEVLSLSNPEDSSDEYFIDEEDEEDNAVKDRNDDDDEEIDEGSPPPPDEDRKSQN
VDALVRGNLVVRRQSLLPRVLSVTEGSVFCRKPFKPPSCNGYDDGNEQLARRLCARKRFV
PWGSSRPVLVTITNQLHVPTVEKDAEEESVTLPPGVDPLVLWQPDESEDGNNLVPIMVDP
LLVRSLRPHQREGVQFMFQCVSGSYTAANMHGCILADDMGLGKTLQSITLLYTLLRQGFD
GKPMVRKAIIVTPTSLVSNWEAEITKWIGQRVQLIALCESTKDDVVSGINNFTSPQSSLQ
VLIVSYETFRMHSSKFSHSGSCDLLICDEAHRLKNDQTATNRALAALPCKRRILLSGTPM
QNDLEEFFAMVNFTNPGILGDASYFRRYYETPIICGREPTATEEEKKLGAERSTELSLKV
NQFILRRTNALLSNHLPPKIVEVVCCKLTPLQLVLYNHFLHSKNVKQAITEEAKQSKILA
YITALKKLCNHPKLIYDTGKSGSPGISGLEDCLHFFPAEMFSKRSGSWTGGDGAWVELSG
KMHVLARLLAHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPHLRLDGTTSIGKRQKLV
NRFNDPSKDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRV
YIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTNSLATQGNFLSTENLRDLFTFHENVR
SEIHEKMNCHRCQIHDNELRSEDGNGDKSVNCGQADQQVNDIGGFARITGCLNRLKSSEN
QVGTPLEEDLGSWGHHFNAASVPDAILQASAGDEVTFVFTNQVDGKLVPIESMDIQKIQG
RERNEDQFKVKGNLERNSKLSQHQNTPQFVSPVRDSMRSSSASSKPMQKMAVKSTRTLKG
ARTARKPKLYLGNQLPIKRSSPDTAGHNDDFE
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgaggaagaagaagttctctcgctatccaatcctgaagattctagcgatgaa
tatttcattgatgaagaagatgaggaagataatgccgtcaaagacagaaacgacgacgat
gacgaagagatcgatgagggatctcctccgccgcctgatgaagatcggaaatcacagaat
gtcgatgctctcgtgagaggcaaccttgttgtgagaagacagtcactgcttccgcgagtt
ctttcagtgacagaaggatcggttttttgtcggaagccttttaagccacccagttgtaat
ggctatgacgatgggaatgaacagcttgctcgtcgtctttgtgcccgcaaacggtttgtt
ccatggggctcttctaggccagtgttggttacaataaccaatcagttgcatgtaccaaca
gtagagaaagatgcagaagaagaaagtgtgactctgccacctggggttgatcctttggtt
ttgtggcaacctgatgaatctgaggatggaaataatttggtgcctataatggtggatcct
ttgcttgtgcgttcccttcgacctcatcaaagagaaggggttcaattcatgtttcaatgt
gtatcagggtcatatactgcagccaacatgcatggatgcatccttgctgacgatatgggt
ttaggaaagacgttgcagtcaattactctactgtacactcttcttcgtcaaggatttgat
ggaaaaccgatggttaggaaagccatcattgtcacaccgaccagtcttgtaagtaattgg
gaggctgaaataacaaaatggattggacaacgagttcagcttatagctctctgtgaaagc
accaaagatgatgttgtttctggaatcaacaatttcacaagcccccagagttctttacag
gtattgattgtctcatatgaaacatttcgaatgcattcatcaaaatttagccacagtggt
tcttgtgaccttctcatatgtgatgaggcacacaggcttaaaaatgaccagacagcaaca
aaccgggcattggccgctttaccgtgcaagcgccgtattttgttatctggaactccaatg
cagaatgacctagaagagttcttcgccatggttaactttacaaatccaggaattctggga
gatgcttcgtattttcgccgttactatgagacaccaattatttgcggtagagaaccaact
gctactgaagaagagaagaagctaggtgctgagcgctctacagaactaagtttgaaagta
aatcagtttatattgagaaggaccaatgcgttgctatcaaatcacctcccaccaaagata
gttgaagttgtttgttgcaagttgactcctttgcagttggtgctgtataaccattttttg
cactccaaaaatgttaaacaggcaatcactgaagaagcaaagcaatcaaagattttggca
tacattaccgcactgaaaaagctctgcaatcatccaaagcttatttatgatactggaaaa
agtggaagtcctggaatttcagggctcgaggactgtttgcacttttttcctgctgagatg
ttctctaagagatctggatcatggactggtggtgatggggcttgggttgaactgtcaggt
aaaatgcatgtcttggctcgactactggcccacctacgtcagagaactgacgatcggatt
gttcttgtctcaaactatacccagacattggatctttttgctcaattatgtcgtgagaga
agatatccccacttgaggcttgatgggaccacatctattggtaagaggcaaaagttggtt
aatcgcttcaatgacccatcaaaggatgagtttgtgtttcttctaagcagcaaggcgggc
ggttgtggcctcaatttaattggtggaaaccgacttgtgttgtttgatccagactggaat
cctgctaatgacaaacaagctgctgcgagagtttggagggatgggcaaaagaaaagagtg
tacatctatagatttctgagcactggaacgattgaagaaaaagtctaccagcgtcaaatg
tcaaaagaagggcttcagaaagttattcaacaggagcaaacaaatagccttgccacacag
gggaactttctttctacggaaaacttacgtgacctgtttacatttcatgaaaatgttagg
tctgaaattcatgaaaagatgaactgtcaccgttgccaaattcatgataatgagctgagg
agtgaagatggaaacggagacaaatcagtgaattgtggtcaagctgaccaacaggttaat
gatataggtggatttgcaagaattactggatgcttgaataggttaaagagctcagagaat
caggtagggactcctctggaagaggatttagggagctggggacatcattttaatgcagca
tctgtgcctgatgccatacttcaagcttcagctggtgatgaggttacttttgtgtttaca
aaccaagtggatgggaagcttgtacctatagagtcgatggatattcaaaagattcaggga
agggaaagaaacgaggaccaattcaaagtcaaagggaacctcgaacgaaattccaagttg
tctcaacatcaaaacactccacaatttgtttctcctgttagggattcaatgcgcagctca
tctgcctcttccaagccaatgcagaaaatggctgtgaaatcaacaagaactttgaaaggt
gcgcgaactgctcgaaagcctaaactttatcttggaaatcagttacctatcaaaagatca
tcccctgatactgcaggtcacaatgatgactttgaataa
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