Tripterygium wilfordii (thunder duke vine): 120014390
Help
Entry
120014390 CDS
T07256
Name
(RefSeq) probable pectate lyase 1
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl00040
Pentose and glucuronate interconversions
twl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
120014390
Enzymes [BR:
twl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
120014390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
120014390
NCBI-ProteinID:
XP_038722260
LinkDB
All DBs
Position
14:9705542..9710581
Genome browser
AA seq
501 aa
AA seq
DB search
MAYRLYCFDCRPSLLLYKGRFRCSSPLTPTLLCFPSSPYICRKQRGSGERNRETAMAELK
RLSCVSLAVLVVMFVGAMTVVFKDEISAARDVVTEHLQSSNNSTMSARLEDVDEVPNKHA
VAYAEEVVAMVEMGIRNATERRKLGYFSCGTGNPIDDCWRCDPNWQRNRKRLADCGIGFG
RNAIGGRDGRFYVVTDPSDNDAVNPRPGTLRHAVIQDEPLWIVFKRDMVIQLKQELIVNS
FKTIDGRGSHVHIANGGCITIQYVTNVIIHGLHIHDCKPTGNAMVRSSPSHFGWRTMADG
DAVSIFGSSHIWVDHNSLSHCADGLVDAVMGSTAITISNNHMTHHNEVMLLGHSDSYTRD
KAMQVTIAYNHFGQGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRYNA
PFNSFAKEVTKRVDTDTNQWKGWNWRSEGDLLLNGAYFTPSGAGASASYARASSLGAKSS
SMVGSMTSNAGALGCRRGRTC
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atggcgtaccgtttgtattgttttgattgtcgtccctctcttttgctctataaagggagg
tttcgctgcagctctcctcttactccaacacttctctgctttccttcctctccgtatatc
tgcagaaaacagagagggagtggagagagaaatagagagacggcaatggctgagttgaag
agattgtcttgcgtgagcttggcagtgcttgtagtgatgttcgtcggagcaatgacggtc
gtgttcaaggatgagatctctgctgcaagggatgtggtaacagagcatttgcagagctca
aacaactcaactatgtcggcgaggttggaagatgttgatgaggtaccaaataaacatgca
gttgcttatgcagaggaggttgtggccatggttgagatgggcatccgcaatgccactgaa
aggaggaagctaggctatttctcttgcggaactgggaatccaattgatgattgctggcgc
tgtgaccccaactggcagcgcaaccgcaagcgccttgcggactgtggcattggctttggt
aggaatgccattggtggccgtgatggccgcttctatgttgttactgatcccagtgataat
gacgctgtcaacccaaggcccggaactctgcgccatgctgtgatccaggacgagcccctc
tggattgtgttcaagagggacatggtcatacaattgaagcaggaactcatcgtcaacagc
tttaaaaccattgatggacgtggatcccatgtccacattgctaatggagggtgcatcacc
atccagtatgttacaaatgttatcatccacggtctccacattcatgactgcaagcctact
ggcaatgccatggtcaggagctctccaagtcactttgggtggaggacaatggctgatggt
gatgccgtctccatctttggatcaagccacatctgggttgaccacaattcactttcccac
tgcgctgatggccttgttgatgctgtcatgggttcaactgccattactatctccaacaac
cacatgacccatcataatgaggtgatgctattgggtcacagtgattcttatacaagagac
aaggcaatgcaagtgacaattgcatataaccattttggacaaggacttatccagagaatg
ccaaggtgcaggcatggatacttccatgtggtgaacaatgactatactcactgggaaatg
tatgcaattggtggaagtgcaaacccaaccatcaatagccaaggcaacagatacaatgct
ccattcaactccttcgcaaaggaggtgacaaagagagttgatactgatacaaaccaatgg
aagggctggaattggagatcagagggagacctgttgctgaatggtgcatacttcacccca
tctggagctggagcgtcagctagctatgctcgagcttcaagcttgggtgccaagtcttct
tccatggttggctccatgacatccaatgccggtgcccttggctgccgcagaggccgtacc
tgctag
DBGET
integrated database retrieval system
