Thiomicrorhabdus xiamenensis: HQN79_06535
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Entry
HQN79_06535 CDS
T07160
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
txa
Thiomicrorhabdus xiamenensis
Pathway
txa00300
Lysine biosynthesis
txa01100
Metabolic pathways
txa01120
Microbial metabolism in diverse environments
txa01230
Biosynthesis of amino acids
Module
txa_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
txa00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HQN79_06535 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
txa01002
]
HQN79_06535 (dapE)
Enzymes [BR:
txa01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
HQN79_06535 (dapE)
Peptidases and inhibitors [BR:
txa01002
]
Metallo peptidases
Family M20
HQN79_06535 (dapE)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Peptidase_M18
Motif
Other DBs
NCBI-ProteinID:
QKI89246
UniProt:
A0A7D4TAQ6
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Position
1412580..1413713
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AA seq
377 aa
AA seq
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MSETIDLAQALIQVDSVTPEDKGCQQMIADYLEPLGFKNESMPFGEVTNLWSRRGNESPC
LVFAGHTDVVPTGPQDAWKFPPFSAHIEGDMLYGRGAADMKSSIACFMAASKRFVESYPE
HRGSIAFLITSDEEGPAVDGTVKVIETLEARNEKFEYCLVGEPSSSKKLADSIKNGRRGS
LNGKLNVKGIQGHIAYPDLADNPIHNLAPALEQLVNINWDHGNEYFPPTSFQVSNIHAGT
GVTNVIPGEIEVLFNFRFSTEHTAEALQQSVQAVLDHHNLDYDIEWNLSGNPFITEGDGE
LIQAVKQACHSIVGYEPELSTGGGTSDGRFIAPTGAQTIELGPLNDTIHKVNECVSVSDL
NKLTDIYYQTMINLLVK
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaaccattgacctggcccaagcattaattcaagttgattccgtaaccccggaa
gacaaagggtgtcagcagatgattgcagactaccttgaacctcttgggttcaaaaacgaa
tccatgcctttcggggaagtcactaacctctggtctcgccgcggtaacgaaagtccttgt
ctggtgtttgccggccatacggacgtcgtaccgaccgggccgcaagacgcctggaaattt
ccacccttttcagcccatatcgaaggcgacatgctgtacggtcgcggcgcagccgacatg
aagagttccatcgcctgttttatggcggcaagcaaacgctttgtcgaatcctatcccgag
cacagaggatcaatcgccttcctgatcaccagtgacgaagaaggcccggcggttgacggt
acggtcaaagtgatcgaaacgctggaagctcgcaacgaaaaattcgaatactgcctggtt
ggcgaaccctccagctctaaaaaactggccgattcaatcaaaaacggacgccgcggctcc
ctgaatggaaaactgaacgtaaaaggcattcagggacatatcgcctatccggatcttgct
gacaacccgattcacaacctggctccagcactggagcaattggtcaacattaactgggat
catggcaacgaatatttcccaccgacatcctttcaggtttccaatattcatgccggcacc
ggtgtcaccaatgtcattcccggggaaatcgaagtcctgtttaatttccgcttctcgacc
gaacatactgcggaagcgctgcagcaaagcgtgcaggcagtactggaccatcacaatctg
gactacgatattgaatggaatctttccggcaacccgtttattaccgagggagacggagaa
ctcattcaagccgttaaacaagcgtgtcattcgattgtcggctacgagccggagctgtcg
accggcggcggaacttccgacggacgttttatcgcgccaaccggcgcgcaaacgatcgag
ctaggccccctgaacgacactatccacaaagtaaatgagtgcgtcagcgtgtcggatctc
aataaactgaccgacatctactatcagactatgatcaatctgttggttaaataa
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