Thermoanaerobacterium xylanolyticum: Thexy_0326
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Entry
Thexy_0326 CDS
T01505
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
txy
Thermoanaerobacterium xylanolyticum
Pathway
txy03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
txy00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Thexy_0326
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
txy03021
]
Thexy_0326
03400 DNA repair and recombination proteins [BR:
txy03400
]
Thexy_0326
Enzymes [BR:
txy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Thexy_0326
Transcription machinery [BR:
txy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Thexy_0326
DNA repair and recombination proteins [BR:
txy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Thexy_0326
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
RnfC_N
7TMR-HDED
Motif
Other DBs
NCBI-ProteinID:
AEF16382
UniProt:
F6BGG4
LinkDB
All DBs
Position
340944..344657
Genome browser
AA seq
1237 aa
AA seq
DB search
MLHPVDAGYKKRMSFARIEEVLDMPNLIEVQKNSYKWFLEEGLREVFRDISPIESFTGNL
SLEFLDYKLDDNPKYSVEECKDRDTTYAAPMKVKVRLTNRDTGEIKESEVFMGDFPLMTD
KGTFIINGAERVIVSQLVRSPGVYYEQQFDKLGKKLFFATVIPNRGAWLEYEEDSNDIFS
VRIDRTRKVPITVFLRALGYGTDAQILDLFGEDERIKATLDKDTTKSEEEGLLEVYKRLR
PGEPPTVESAKSLLYSLFFDPKRYDLAHVGRYKFNKKLALSSRLTNQKAATKIVNPLTGE
IIVEEGQRISRETAKKIQDCGINEVEVLVEGRPVKIIGNNTVDINEYPLSFDVSDLKIKE
KVHLTVLKEILNNFSSEDEIKNEIRRRLDELIPKHITKDDIIASVNYNLNLSYGVGFVDD
IDHLGNRRLRSVGELLQNQFRIGLSRMERVVRERMTIQDVSEITAQNLINIRPVVAAIKE
FFGSSQLSQFMDQTNPLAELTHKRRLSALGPGGLSRERAGMEVRDVHHTHYSRMCPIETP
EGPNIGLIGSLATYARINEYGFIEAPYRKVDKSTGKVLNEIVYMTADVEDEYVIAQADEP
LDEENRFINERVTVRSKDDILSVPREEVDFMDVSPKQVVSVATAMIPFLENDDANRALMG
SNMRRQAVPLLVPQAPIVGTGIEYKAARDSGVVNIARNSGIVERVTADKIVIKTDDGRRD
EYELLKFKRSNQGTCINCRPIVNEGDRVEKGQVISDGPSTELGEIALGRNVLVGFMPWEG
YNYEDAILISEELVKEDALTSIHIEEYESEARDTKLGPEEITRDIPNVGEEALKDLDERG
IIRIGAEVTAGDILVGKVTPKGETELTAEERLLRAIFGEKAREVRDTSLRVPHGEGGIVV
DVKVYTRENGDELPPGVNEMVRVFIAQKRKISVGDKMAGRHGNKGVVSRILPVEDMPFLP
DGTPLQICLNPLGVPSRMNIGQVLEVHLGLAAKALGWYMATPVFDGAHEEDIQELLEKAG
FSPDGKIQLYDGRTGEPFDHPVTVGYMYMLKLHHLVDDKMHARSTGPYSLVTQQPLGGKA
QFGGQRFGEMEVWALEAYGAAHTLQEILTVKSDDITGRVKTYESIVKGENIPEPGVPESF
KVLVKELQSLCLDVKVLTEDNQEVALKEFEDDDDDDISEDTININIEGREDAPPEVNYGE
EFNEDFDEDKDAFDDLNFEPNDIDFGDSDSFDDDYDL
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atgttacatcctgttgatgccggctacaagaagcgaatgagctttgcaaggattgaagaa
gtcttggatatgcctaatttgatcgaagttcaaaaaaattcctataagtggtttttggaa
gaaggtttaagggaagttttccgagacatttctccaattgagagttttaccggcaatttg
tctttagaatttctagactataagcttgatgacaatcctaaatactctgtagaggaatgc
aaagatagggatactacttatgcggcaccaatgaaagtaaaggtaagattgactaatcgc
gataccggtgaaatcaaggaatcagaagtttttatgggtgattttcctttgatgaccgac
aaaggcactttcataataaatggtgcagagcgtgtcatcgtcagtcagttggtgagatcg
ccaggagtatattacgaacaacagtttgataaattagggaaaaagctattttttgcaact
gttataccaaatagaggtgcatggctggaatacgaagaagattcaaatgatatcttttct
gttagaatagacaggacgaggaaagttccaattactgtttttttaagggctttaggttat
gggacagatgcacagatattagatctttttggagaagatgaaaggataaaagcaacactt
gataaagatactacgaaatctgaagaagaaggtttgcttgaggtatataaaagattgagg
cctggtgaaccacctacagttgaaagcgctaaaagtttgttatactctttattctttgat
ccaaaaagatacgacctcgcgcatgttggtcgttataaatttaataaaaagcttgcacta
agttcaaggctgacaaatcaaaaggctgctacaaagatagttaatccactgacgggtgaa
atcattgttgaggaaggtcaaagaatatcaagagagactgctaaaaaaatccaggattgc
ggtataaatgaagttgaagtgcttgttgaaggaagaccagtgaagataattggcaataat
actgttgatattaatgaatatccgctttcttttgatgtttcagatctaaagataaaagag
aaagttcatttgactgttttaaaagagatccttaataatttttcaagcgaagatgagata
aaaaatgagataagaagaagattggacgaattaatacctaaacatattactaaagatgat
ataattgcttctgtaaattacaatttaaatctttcctacggtgttggatttgttgatgat
attgatcaccttgggaatagaaggcttagatcagttggcgaattgcttcaaaatcagttt
agaataggtctatcaaggatggaaagagtagttagggaaagaatgactatacaggatgtc
agcgaaattactgctcaaaatttgataaatattaggcctgttgttgctgcaattaaggag
ttttttggaagttcacagctttcacagtttatggatcagacaaatccccttgcagagctg
actcacaagagaagattaagtgcattaggtcctggaggactaagtagagaaagagccgga
atggaagttagggatgtccatcacacgcattacagcaggatgtgtcctatagaaacgcct
gaaggaccaaacataggacttataggttctcttgctacatatgcaaggattaatgaatat
ggatttattgaagctccttatagaaaagtggataaatcgacaggtaaagttctcaatgag
attgtgtatatgactgcagatgtggaagatgaatatgtaatcgctcaagcagatgagcct
cttgatgaagaaaatagatttataaatgagagagttacagtccgctcaaaagacgatatt
ttgtcagtgcccagagaagaagtggattttatggatgtttcaccgaaacaggtggtttct
gtcgctaccgcaatgattccttttttggaaaatgacgatgcaaacagggctctgatgggt
tcaaacatgcggaggcaggctgttccgcttcttgttccgcaggcacctatcgttggaact
ggaattgagtacaaagctgccagggattcaggtgttgtaaatattgccagaaacagtggg
atagtagaaagagttacagcagataaaatagtcataaagacagatgatggaagacgagac
gagtacgaacttcttaaatttaagaggtcaaaccagggaacttgcataaattgtagaccg
atagtaaatgaaggggatcgtgttgaaaaaggacaggttataagcgatggaccttctaca
gagttgggtgaaattgcacttggacgcaatgtattggttggatttatgccttgggaaggt
tacaattacgaggatgctattttaattagcgaagaacttgtaaaagaagatgctcttaca
tctatccatattgaggaatacgaatcagaagccagagatacgaaattaggacctgaagaa
ataacaagggatattcccaatgttggcgaagaagcattaaaggatttagacgagagagga
atcatacgcatcggtgcagaggttacggctggagatattctcgtagggaaagtgactcca
aaaggtgaaacagagcttactgcagaagaaagactattaagagctatatttggagagaaa
gcaagggaagtcagagatacttctttaagagttccacatggtgaaggcggtatagttgta
gatgtcaaagtgtacacgagagaaaatggcgatgaactgcctccaggagtaaatgagatg
gtgagagtttttatcgcacagaaaaggaagatatctgtcggcgataagatggcaggtagg
cacggaaacaaaggtgtcgtttcaaggatacttcctgttgaggatatgccatttttaccc
gatggtacaccacttcagatttgtttgaaccctcttggtgttccttcccgtatgaatatc
ggtcaggttctggaagtccacttgggacttgcagcaaaagctttggggtggtacatggct
acgccggtatttgatggtgcccatgaggaagatatacaagagctgcttgaaaaagcggga
ttctcgccagatggaaagatacagctttacgatggaagaacaggtgaaccttttgaccat
ccagttactgttggatatatgtacatgctcaagttgcatcaccttgttgatgataaaatg
catgctaggtctacagggccatattcgcttgtcacacaacagccacttggcggtaaagca
cagtttggtggtcagagatttggtgagatggaagtatgggcgcttgaagcatacggtgct
gctcatacattgcaagagatacttacagttaagtctgatgatataacgggacgtgttaaa
acatacgaatctatagtcaaaggtgaaaatataccagaaccaggtgttccagagtcattt
aaggttcttgttaaagagttgcaaagtctttgccttgatgttaaagtattgacggaagat
aatcaagaagtagcactaaaagaatttgaagatgacgacgatgatgacatttcagaagat
acgataaacatcaatattgagggaagagaagatgcgccgccagaagtaaattatggcgaa
gaatttaacgaagattttgatgaagataaggatgcatttgacgatcttaactttgaacct
aacgatatagactttggcgatagtgacagctttgatgatgattatgatttataa
DBGET
integrated database retrieval system
