Thiosulfativibrio zosterae: THMIRHAT_19740
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Entry
THMIRHAT_19740 CDS
T06856
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
tzo
Thiosulfativibrio zosterae
Pathway
tzo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tzo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
THMIRHAT_19740 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tzo03400
]
THMIRHAT_19740 (ung)
Enzymes [BR:
tzo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
THMIRHAT_19740 (ung)
DNA repair and recombination proteins [BR:
tzo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
THMIRHAT_19740 (ung)
Prokaryotic type
THMIRHAT_19740 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Bclx_interact
Motif
Other DBs
NCBI-ProteinID:
BBP44228
UniProt:
A0A6F8PQC0
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All DBs
Position
2176402..2177088
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AA seq
228 aa
AA seq
DB search
MTENNIQLSESWLAQIGDEFNQPYMQQLKGFLQSEKAQKKLILPHSSLWFKALNSTPFEA
VKVVIIGQDPYPTPGHAHGLCFSVLPDVKPLPKSLLNINKELLDDCGVNNQHSGYLQSWA
EQGVLLLNAVLTVEAGKANAHQNHGWETFTDAIIRQLNNHKDHLVFILWGSYAQKKGAII
DRQRHYVIESVHPSPLSAYRGFFGSKPFSKTNQYLTSHGLQPIHWQIP
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgacagaaaataacatacaactgagtgaaagttggttggcgcaaattggggatgagttt
aatcagccctatatgcagcaattgaaaggttttttacaaagtgaaaaagcccaaaaaaag
ctgatattacctcacagctcgctttggtttaaagccctcaactcgaccccttttgaagcc
gtcaaagttgtgattattggacaagacccttacccaaccccagggcatgcgcatggtttg
tgcttttcagtgttacctgatgtaaaacctcttccaaaatcattactgaatattaataaa
gaactgctagacgattgcggagttaacaatcaacattcaggatatttacaatcctgggca
gaacaaggggttttattactcaatgctgtactcacggttgaagccggtaaagccaatgcc
caccaaaatcacggttgggaaacatttaccgatgccatcattcgacagttaaataaccac
aaagatcatttagtgtttatcctttgggggagttatgcacaaaaaaaaggcgcgattatt
gaccgccaacgccactatgtgattgaaagtgttcatccttctcccttatccgcctacaga
gggttctttggcagcaagcctttctcaaaaaccaatcaatatctgacaagccatgggtta
caacctatccattggcaaatcccataa
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