Ursus arctos horribilis (North American brown bear): 113245929
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Entry
113245929 CDS
T05909
Symbol
MSH6
Name
(RefSeq) DNA mismatch repair protein Msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
uah
Ursus arctos horribilis (North American brown bear)
Pathway
uah01524
Platinum drug resistance
uah03430
Mismatch repair
uah05200
Pathways in cancer
uah05210
Colorectal cancer
Brite
KEGG Orthology (KO) [BR:
uah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
113245929 (MSH6)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
113245929 (MSH6)
09162 Cancer: specific types
05210 Colorectal cancer
113245929 (MSH6)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
113245929 (MSH6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
uah03400
]
113245929 (MSH6)
DNA repair and recombination proteins [BR:
uah03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
113245929 (MSH6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
PWWP
MutS_IV
MutS_II
MUM1-like_PWWP
HORMA
WPP
UPF0524
Motif
Other DBs
NCBI-GeneID:
113245929
NCBI-ProteinID:
XP_026342081
LinkDB
All DBs
Position
Unknown
AA seq
1359 aa
AA seq
DB search
MSRQSTLYSFFPKSPALTNANKASVRAPGEGGGAAAAATGASRSPGGDAAWSEAEPGPLA
GSASPPESRNINGGLRRSAAPAVPASSCDFSPGDLVWAKMEGYPWWPCLVYNHPFDGTFI
REKGKSVRVHVQFFDDSPTRGWVSRRLLKPYTGSKSKEVQKGGHFYSSKPEILRAMQRAD
EALNKDKIERLKLAVCDEPSEPEEEEEMEVGATYSSDKSEEDNEVESEEEVQPKVQGSRR
SSRQVKKRRVISDSESDIGGSDVEFKPDAKEEGSSDELSSGVGDSDSEGLDSPVKVASKR
KKMVTGNGSLKRKSSRKEMPLATKRSTGISSETKSALNAFSAPQNSESQAHIGGGCDDSS
RPTVWYHETLEWLKEEKRRDLHRRRPDHPDFDASTLYVPEDFLNSCTPGMRKWWQIKSQN
FDLVIFYKVGKFYELYHMDALIGVNELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKV
ARVEQTETPEMMEARCRKMAHISKYDRVVRREICRVITKGTQTYSVLEGDPSENYSKYLL
SLKEKEEDSSGHTRVYGVCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPPVQVLFEKGN
LSTETKMILKGSLSSSLQEGLIPGSQFWDAAKTLRTLLEEGYFKEKLNEDSGVMLPQVLK
GMTSESDSLGLTPGEKSELALSALGGCIFYLKKCLIDQELLSMANFEEYIPLDSDMVSAT
GPGAFFAKANQRMVLDAVTLNNLEIFMNGTNGSTEGTLLEKIDTCHTPFGKRLLKQWLCA
PLCSPYAINDRLDAIEDLMVVPDKISDVVDLLKKLPDLERLLSKIHNVGSPLKSQNHPDS
RAIMYEETTYSKKKIIDFLSALEGFKVICKIIEIMEEDVDNFKSKILKQVVTLQTKTPEG
RFPDLTLELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALADIRENEQSLLEYLEKQRS
RIGCRTIVYWGIGRNRYQLEIPENFITRNLPEEYELKSTKKGCKRYWTKTIEKKLANLIN
AEERRDTSLKDCMRRLFYNFDKNYKDWQSAVECIAVLDVLLCLANYSRGGDGPMCRPVIL
LPEEGTPPFLDLRGSRHPCIMKTFFGDDFIPNDILIGCEEEENGKAYCVLVTGPNMGGKS
TLMRQAGLLAVMAQTGCYIPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELSETASIL
THATAHSLVLVDELGRGTATFDGTAIANAVVKELAENIKCRTLFSTHYHSLVEDYSQNVA
VRLGHMACMVENECEDPSQETITFLYKFIKGACPKSYGFNAARLANLPEEVIQKGHRKAR
EFEKMTQSLRLFREVCLASERSTVDAEAVPKLLALIKEL
NT seq
4080 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgacagagcacgctgtacagcttcttccccaagtctccagcgctgactaatgct
aataaggcctcggtcagggcgccaggtgaaggcggcggcgccgccgctgctgccaccggg
gcctcccgttctcccggcggggatgcggcctggagcgaggccgagcctgggcccttggca
ggctccgcgtcgccgccggagtcgaggaacatcaacggagggctgcggagatctgccgcc
cctgcggtccctgccagttcttgtgacttctcaccaggtgatttggtttgggccaagatg
gagggttacccctggtggccttgcctggtttacaaccacccttttgatggaacattcatc
cgtgagaaagggaagtctgttcgagttcatgtacagttttttgatgacagcccaacaagg
ggctgggttagcagaaggctattaaagccatatacaggttcaaaatcaaaggaagtgcaa
aaaggaggtcatttttacagttcaaagcctgaaatactcagagcaatgcaacgtgcagat
gaagccttgaataaagacaagattgagaggctaaaattggcagtgtgtgatgagccctca
gaaccagaggaagaagaagagatggaggtaggtgcaacttactcatcagataagagtgaa
gaagataatgaagttgaaagtgaagaggaagtacagcctaaggtccaaggatctaggcga
agtagccgccaagtaaaaaaacgaagggtcatatcagactctgagagtgacattggtggc
tctgatgtggaattcaagccagatgctaaggaggaaggaagtagtgatgaactaagcagt
ggggtgggggatagtgacagtgaaggcctggacagtcctgtcaaagttgcttcaaagcgg
aagaaaatggtgactggaaatggctctctcaaaaggaaaagttcaaggaaggaaatgccc
ttggccaccaaacgatcaactggcatttcgtcagaaaccaagagtgctttgaatgctttc
tctgcccctcaaaattctgaatctcaagcccacattggtggaggatgcgatgatagtagt
cgccccactgtctggtatcatgaaactttagagtggctcaaggaggaaaagaggagagat
ctacacaggaggcgacctgatcaccctgattttgatgcatccacactctatgttcctgag
gatttccttaactcctgtactcctggcatgaggaagtggtggcagattaagtctcagaac
tttgatcttgttatattttataaggtggggaagttttatgagctgtaccacatggatgct
cttattggagtcaacgaactaggtctggtattcatgaaaggcaactgggctcattctggt
ttccctgaaattgcatttggccgatattccgattctctggttcagaaaggttataaagta
gcacgagtggaacagactgagacccctgaaatgatggaggcacgatgccggaagatggca
catatatctaagtatgacagagtggtgaggagggagatctgtagagttattaccaagggt
acacagacctacagtgttttggaaggtgacccctctgagaactacagtaagtatcttctt
agcctcaaagaaaaagaggaggattcttctggccacactcgggtgtatggagtatgcttt
gttgatacctcactgggaaagtttttcataggtcagttttcagatgatcgccattgctcc
agatttaggactctggtggcacactatcctccagtacaagtcctatttgagaaaggaaat
ctctcaacagaaactaagatgattctgaagggttcattatcctcctctcttcaggaaggt
ctgataccaggctcccagttttgggatgcagccaaaactttgagaactctccttgaagaa
ggatattttaaggaaaagttaaatgaggacagtggggtgatgttaccccaggtgcttaaa
ggtatgacctcagagtctgattctcttgggttgacaccaggagagaagagtgaattggcc
ctgtctgctctaggtggttgtatcttctacctcaaaaaatgtcttattgatcaagagctt
ttatcaatggctaattttgaagaatacattcccttggattctgacatggtcagtgctaca
ggacctggtgctttttttgctaaagccaatcaacgaatggtgctagatgctgtgacatta
aacaacttagagattttcatgaatggaacaaatggttctactgaagggaccctgctagaa
aagattgatacttgccatactccctttggtaagcggcttctaaagcagtggctttgtgcc
ccactctgtagcccttatgctatcaatgatcgtctagatgctatagaagatctcatggtt
gtgcctgacaaaatctctgatgtggtagaccttctaaagaagcttccggaccttgagagg
ctgctgagtaaaattcataatgttgggtctcccctgaagagccaaaaccacccagatagc
agggctatcatgtatgaagaaactacatacagcaaaaaaaagattattgattttctttct
gctctagaaggattcaaagtaatatgtaaaattatagagattatggaagaagacgttgac
aactttaagtctaaaatccttaagcaggttgttactctacagacaaaaacccctgagggc
cgttttccagatttgactctagagctgaaccgatgggatacagcctttgatcatgaaaag
gctcgaaagactggactaattactcccaaagcaggatttgactctgattatgaccaagct
cttgctgacataagagaaaatgaacagagcctcctggaatacttggagaaacagcgtagt
cgaataggctgtaggaccattgtctactgggggatcggtaggaaccgttatcagttggaa
attccagagaattttatcactcgtaatttgccagaagaatatgagttgaaatctaccaag
aagggctgtaagcggtactggaccaaaactattgagaagaagttggctaatctgataaat
gctgaagaacggagagatacatcattgaaggactgcatgcggcgactgttctataacttc
gataaaaattacaaggactggcagtctgctgttgagtgcatcgcagtattggatgtgtta
ttgtgcctggctaactacagtcgagggggtgatggccctatgtgtcgtccagtaattctg
ttgccagaagaaggcactcctcccttcttagaccttagaggatcacgtcatccctgcatt
atgaagactttttttggagatgactttataccaaatgacattctgataggctgtgaggaa
gaggaaaatggcaaagcttactgtgtgcttgtcactggacctaacatggggggcaagtcg
acgctcatgagacaggctggcctgttagctgtaatggcccagacgggttgttacatacct
gctgaagtgtgtaggctcacaccaattgatagagtatttactagacttggtgcctcagac
agaataatgtcaggtgaaagtacattttttgtggagttgagtgaaactgccagtatactt
acgcatgcaacagcacattctctggtgcttgtggatgaattaggaagaggtactgcaaca
tttgatggaacagcaatagcaaatgcggttgttaaagaacttgctgagaacataaagtgt
cgtacactgttttctacccactaccactcattagtagaagattattctcaaaatgttgca
gttcgcctgggccacatggcatgcatggtagaaaatgaatgtgaggatcccagccaggag
actattaccttcctctataaattcattaagggagcttgtcctaaaagctatggctttaat
gcagcaaggcttgccaaccttccagaggaggttattcaaaagggacatagaaaagcaaga
gaatttgaaaagatgactcaatcactgcgattatttcgggaagtttgcctggctagtgaa
aggtcgactgtagatgctgaagctgtccctaagttgctggctttgattaaggaattatag
DBGET
integrated database retrieval system
