Ursus arctos (brown bear): 113255081
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Entry
113255081 CDS
T05909
Symbol
SKIC3
Name
(RefSeq) SKI3 subunit of superkiller complex protein
KO
K12600
superkiller protein 3
Organism
uah
Ursus arctos (brown bear)
Pathway
uah03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
uah00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113255081 (SKIC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
uah03019
]
113255081 (SKIC3)
Messenger RNA biogenesis [BR:
uah03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
113255081 (SKIC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_19
TPR_16
TPR_8
TPR_14
TPR_17
TPR_CcmH_CycH
TPR_11
TPR_12
ANAPC3
ARM_TT21_C
TPR_9
ARM_TT21_5th
Sel1
Fis1_TPR_C
ARM_TT21_2nd
BTAD
TPR_15
TPR_20
TPR_30
TPR_5
Motif
Other DBs
NCBI-GeneID:
113255081
NCBI-ProteinID:
XP_044239933
LinkDB
All DBs
Position
Unknown
AA seq
1582 aa
AA seq
DB search
MRMRSDSSLGVWRRSICTRMSSKEVKTALKSARDAIRNKEYKEALKHCKTVLKQEKNNYN
AWVFIGVAAAELEQPDQAQGAYKKAAELEPDQLLAWQGLASLYEKCNHINAKDDLPGVYQ
KLLDLYESVDKQKWCDVCKKLVDLYYQEKKHVEVARTWHKLIKTRQEEGADNQELHQLWR
KLTQLLAESTEDQNNETQQLLLTAFENALDLSDKIPSEDHQVLYRHFIHCLSKFPHETAR
LKKACEGMINIYPTVQYPLEVLCLHLIESGSLTEEGQQYCCRLVEMDSKSGPGFIGLGIK
ALQDKKYEDAVRNLTEGLKESPLCTTGWYHLAEAQVKMHRPKEAVLSCNQALKNIDNLGV
SGRSLHQKNLCLRLKAEALIKLSDYESSVEAICTLDQVSDANNIPGLLVLKSLAYLNKGS
LDEASKIMEDLLSSYPDLAEVHALEALIHFTKKDYLRAEKCFQRALEKDAEVAEYHYHLG
LTYWFMDEETRKDKTKALTHFLKAARLDTYMGKVFCYLGHYYRDVVGDKNRARGCYRKAF
ELDDTDAESGAAAVDLSVELEEMETALAILTTVTQKASAGTAKWAWLRRGLYYLKAGQHS
QAVADLQAALRADPKDFNCWESLGEAYLSRGGYTTALKSFTKASELNPESTYSVFKVAAI
QQILGKYKEAIAQYQLIIKKKEDYVPALKGLGECHLMMAKAALVDYLDGKAVDYIEKALE
YFTWALQHQADVSCLWKLVGDACTSLYAVSPSKVNVNVLGVLLGQKEGKQVLKKNELLHL
GGRCYGRALKLMSTSNTWCDLGINYYRQAQHLAETGNNTNDLKELLEKSLHCLKKAVRLD
SKNHLYWNALGVVSCHNGIRNYALAQHCFIKSIQSEQINAVAWTNLGVLYLANENIEQAH
EAFKMAQSLDPSYLMCWIGQALIAETVGSYDTMDLFRHTTELSMHTEGAIGYAYWVCTTL
QDKSNRDTELYRYNIVQMNAIPAAQVVLSKYIERIQNYAPAFTMLGYLNEHLQLKKEAAD
AYQRAMLLLQSAEDQDTYNVTVRNYGRLLCSIGEYDKAIQAFKSTPLEELEDLIGFALAL
FMKGLYKDSSKAYERALSIVESEQDKAHVLTALAITEYKQGKMDVAKTLLFKCSILKEPT
TESLQALCALGLTMQDATLSKAALNELLKHIKQKDDYPKCLLTSAIYALQGRSVAVQRQA
SKAVHNNPADPALWSLLSRVVAQYTHRSAKGGSVAGNVAHILDSNHGKKALLYTAVNQLA
MGSSSAETENNIALKTIQKAALLSPGDPAVWAGLMAACHADDKLALVNNTQPKRMDLYLA
LLSAVSASIKDKEFLKDYNQSLEKWSLSQAVTGLIDTGRISEAEALCTKNLKSNPDQPAV
ILLLRQVQCKPLLESQSPLPDAVLEELQKAVMSNSASVPAWQWLAYIYQSQGMMGAAEMC
YRKSLQVASQQGSWSGKLSSLLRLALLALKAYMANISNDHWSSLVQEATTEALKLCFCPL
AVFLQALLQFNRKMGARETRRLLERVVYQPGYPKSIVSTARWYLLRHLHAKNDYELIDVL
VNNAKTHGDTRALELNQKLSSE
NT seq
4749 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatgcgctcagattccagccttggcgtttggaggagaagcatctgtaccaggatg
tccagcaaggaagtaaagactgctctaaaaagtgccagagatgcaatcagaaacaaagaa
tacaaagaagctttgaaacattgtaagacagtgttaaaacaagagaaaaataactataat
gcctgggtttttattggtgttgctgcagccgagttagaacaacctgatcaggcccagggt
gcctataagaaagctgctgaactagaaccagaccaattactggcttggcaggggttagca
agcttgtatgagaaatgtaatcacataaatgctaaggatgacttacctggtgtttaccag
aagctcctggatctttatgaaagtgttgacaaacagaagtggtgcgatgtctgtaagaaa
cttgtggatctatattaccaagaaaagaaacacgtagaggtagcccgaacatggcacaaa
ttgataaagacacggcaggaggaaggtgcagacaaccaagagcttcatcagctgtggagg
aaattgactcagttgctagctgagagtactgaggatcagaataatgaaacccagcaattg
cttttaactgcttttgagaatgcactggacttatcagataagattcctagtgaagatcac
caagtactttatagacatttcattcactgtttatccaaatttcctcatgagactgctaga
ttgaagaaggcctgtgaaggaatgataaacatctatcccactgtacaatatccattagaa
gtgctttgtttgcatttaattgaatcaggtagtcttactgaggaaggacagcagtattgt
tgcagactagtggaaatggattccaaaagtggcccaggcttcattggtttaggcattaaa
gcattacaagacaaaaagtatgaagatgctgttaggaacctaacagaagggttaaaggaa
agccctctttgcacaactggatggtatcatctggcagaagctcaggttaaaatgcacaga
cctaaggaagctgttctttcatgcaatcaagctctgaagaacatagataatcttggtgtg
tctggtcgcagtcttcatcagaagaatctttgtctccgtttgaaagcagaggctttgatt
aagctctcagattatgaatcttcagtggaagcaatttgtactcttgatcaggtttctgat
gcaaataatatcccaggacttttggttcttaaaagcttggcctatctgaacaaaggctca
ttagatgaagcttcaaagattatggaagaccttctctcttcctaccctgacctagctgaa
gttcatgccctggaggctttgattcattttaccaaaaaggactatctacgagcagagaaa
tgttttcagagagctcttgagaaagatgctgaagttgctgaatatcattaccaccttggg
ttaacatattggttcatggatgaagaaacaaggaaagataaaacaaaggctcttacccac
tttctaaaggctgccagactggatacatacatgggcaaagtcttctgctatttaggtcat
tactacagagatgtggtaggagataaaaacagagcccgtggctgttacaggaaagctttt
gaattagatgatactgatgctgagtctggagctgcagcagttgacttaagcgtggagctt
gaagagatggaaactgccttagctatcctaacaacagtaactcaaaaggcaagtgctgga
acggcaaaatgggcctggctcaggcgaggactatactatttgaaagctggtcagcattct
caagcggtggctgatttacaggcagcattaagggcagacccaaaggacttcaattgttgg
gagtcattaggagaggcatacttaagcagaggtggttatacgacagccttgaaatccttc
acaaaagccagtgagctgaacccggaatccacatacagtgtgtttaaggttgcagcaata
cagcaaatcctaggcaaatataaggaggcgatagctcaataccagctgatcattaaaaag
aaagaagattatgtgccagctttgaaaggtttgggcgaatgccatcttatgatggcaaaa
gcagctctagtcgattatcttgatggaaaagctgtagactacatagaaaaagcactggaa
tattttacttgggctctgcagcatcaagctgatgtgtcttgcctttggaagctagttggg
gatgcttgtaccagtctgtatgctgtctcaccatctaaagtgaatgttaatgttttagga
gtccttctaggtcagaaagaaggaaaacaagtattaaagaagaatgagctcctccatctt
ggaggaaggtgttatggtcgtgcgttaaaactgatgtctacatctaatacgtggtgtgat
cttggaattaattattatcgccaagcacaacatctagcagaaacaggcaacaatacaaat
gatcttaaagagttgttggagaaatctttacattgtctgaaaaaggctgtgagacttgac
agtaaaaatcacttatactggaatgctcttggtgtggtttcatgtcacaatggtattaga
aattacgcccttgctcaacactgtttcatcaagtctatccagtcagaacaaattaatgct
gttgcatggaccaacttgggagtgttataccttgcaaatgaaaacattgagcaagctcat
gaagctttcaaaatggctcagtctcttgatccatcttatttaatgtgctggattggacaa
gctcttattgcagagacagttggaagttatgacactatggatcttttcaggcacactaca
gaactcagtatgcatactgagggagcaataggttatgcttactgggtctgtacaacattg
caagataaaagcaacagagatacagagctataccgatacaacattgttcagatgaatgct
atcccagcagcacaagttgttttgagtaaatacatagaaagaattcagaattatgctcca
gctttcacaatgttgggttacttaaatgaacatctacaactgaaaaaggaagccgcagat
gcataccaaagggcaatgttattgttacagagtgcggaagaccaagatacttacaatgtt
acagtaaggaattatggcagattgttatgttccattggtgaatatgataaagctatccag
gcttttaagtcaacaccccttgaagagttggaagacctcataggttttgcattggcttta
tttatgaaaggtctatataaagatagcagcaaagcctatgagagagccttgtcgattgtt
gaatcagagcaggacaaagcccatgtcttgacagctctggcgataacggagtataaacaa
ggaaaaatggatgtagccaagacattgctatttaaatgctctatcttaaaggaaccaacc
acagaaagccttcaagccctgtgtgctctgggattgacaatgcaggatgctacactgtca
aaagcagcacttaatgaattactgaagcacatcaaacagaaagatgattatcccaagtgc
cttcttacttcagcgatttatgcactgcagggccgcagtgtggcagtgcagagacaagca
tctaaagctgttcacaataacccggctgatcctgctctttggtctttgttgtcccgagta
gtcgctcagtatactcaccgaagtgcaaagggaggttctgtagcaggaaatgtggctcat
attttggactcgaatcatggaaagaaggcgttactgtacactgcagtaaatcagttagct
atgggaagcagttcagcagaaactgaaaacaatattgcactgaagaccattcagaaagca
gctcttctttctccaggtgatcctgctgtctgggctgggctaatggcagcctgtcatgct
gatgacaaactggctctagtgaacaacactcagccaaagagaatggatttgtacttggca
ctgttgtctgctgtttctgcttcaattaaagacaaagaattccttaaggattataaccaa
tctcttgaaaagtggtctctctcccaagctgtcactggtctaatagacacaggaagaata
tctgaagctgaagccctctgcacaaagaatttaaaaagtaaccctgatcagccagctgtt
atcttacttttgagacaagttcagtgtaaaccactcctggagtcacaaagccctctccca
gacgctgtacttgaagagctgcaaaaagcagtcatgtccaactccgcctctgttccagcg
tggcagtggctggcatacatatatcagtcccaaggaatgatgggtgctgcagagatgtgt
tatagaaagagtctacaagtagcatcccaacagggcagttggagtgggaagctgtcgagt
ctgttgagactagctctccttgctttaaaagcctatatggctaatatttccaatgatcac
tggtcatctttggttcaagaagctacaactgaggccttgaaactttgcttttgtccattg
gctgtctttttacaagctttgttacaattcaaccgcaaaatgggggcaagagagacacgg
cgacttttggaaagagtggtgtatcagcctgggtatcccaagtctattgtatcaactgca
cgttggtatctgctgagacacttacatgccaaaaatgactacgagcttattgatgtgctg
gtaaacaatgccaaaactcatggagatacaagagcattggaattgaatcagaaattgtcc
tcagagtaa
DBGET
integrated database retrieval system
