Ursus americanus (American black bear): 123792828
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Entry
123792828 CDS
T07931
Symbol
SCN5A
Name
(RefSeq) sodium channel protein type 5 subunit alpha
KO
K04838
voltage-gated sodium channel type V alpha
Organism
uar
Ursus americanus (American black bear)
Pathway
uar04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
uar00001
]
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
123792828 (SCN5A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
uar04040
]
123792828 (SCN5A)
Ion channels [BR:
uar04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
123792828 (SCN5A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
GPHH
IQ
CcmD_alt
Motif
Other DBs
NCBI-GeneID:
123792828
NCBI-ProteinID:
XP_045654175
LinkDB
All DBs
Position
Unknown
AA seq
2017 aa
AA seq
DB search
MADFLLPRGTSSFRRFTRESLAAIEKRMAEKQARGSAASQESREGLPEEEAPQPQLDLQA
SKKLPDLYGNPPRELIGEPLEDLDPFYSTQKTFIVLNKGKTIFRFSATNALYVLSPFHPV
RRAAVKILVHSLFSMLIMCTILTNCVFMAQHEPPPWTKYVEYTFTAIYTFESLVKILARG
FCLHAFTFLRDPWNWLDFSVIVMAYTTEFVDLGNVSALRTFRVLRALKTISVISGLKTIV
GALIQSVKKLADVMVLTVFCLSVFALIGLQLFMGNLRHKCVRNFTALNDTNGSVEADGLV
WESLDLYLSDPGNYLLKNGTSDVLLCGNSSDAGTCPEGYRCLKAGDNPDHGYTSFDSFAW
AFLALFRLMTQDCWERLYQQTLRSAGKIYMIFFMLVIFLGSFYLVNLILAVVAMAYEEQN
QATIAETEEKEKRFQEAMEMLRKEHEALTIRGVDTVSRSSLEMSPLAPVTTHERRSKRRK
RMSSGTEECGDDRFPKSDSEDGPRAMNRLSSIHGLSRTSMKPRSSRGSIFTFRRRDLGSE
TDFADDENSTAGDSESHRTSLLVPWPLRRPSAQGQLSPGTSAPGHALNGKRNSTVDCNGV
VSLLGAGDAEATSPGSHLLRPVIPDRPPDTTTPSEEPGRPQMLNPQAPCMDGFEEPGERQ
RALSAVSVLTSALEELEESHRKCPPCWIRFAQRYLIWECCPLWMSIKQKVKFMVMDPFAD
LTITMCIVLNTLFMALEHYNMTTEFEEMLQVGNLVFTGIFTAEMTFKIIALDPYYYFQQG
WNIFDSIIVILSLMELGLSRMGNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNSVGALG
NLTLVLAIIVFIFAVVGMQLFGKNYSEQRYRISDSGLLPRWHMMDFFHAFLIIFRILCGE
WIETMWDCMEVSGQSLCLLVFLLVMVIGNLVVLNLFLALLLSSFSADNLTAPDDDGEMNN
LQLALARIQRGLRFLKRTTWDFCCGLLQRRPQKPAALATHGQLPSCIATSSSPPPPESEK
APPARKETRFEEDKRPGQGTPGDTEPVCVPIAVAESDTDDQEEDEENSLGTEEESSKQQE
SQPVSGSPEALPEPRAWSQVSETASSEASVAQADWRQRRKLEPPAPGCSETHEDSYSEGS
TADMTNTADLLEQIPDLGEDVKDPEDCFTEGCVRRCPCCTVDTTQGPGKVWWRLRKTCYR
IVEHSWFETFIIFMILLSSGALAFEDIYLEERKTIKVLLEYADKMFTYVFVLEMLLKWVA
YGFKKYFTNAWCWLDFLIVDVSLISLVANTLGFAEMGPIKSLRTLRALRPLRALSRFEGM
RVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFGRCINQTEGDLPLNYTIVNN
KSDCESFNVTGELYWTKVKVNFDNVGAGYLALLQVATFKGWMDIMYAAVDSRGYEEQPQW
EYNLYMYIYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKLGGQDIFMTEEQKKYYNAMKK
LGSKKPQKPIPRPLNKYQGFLFDIVTKQAFDVTIMFLICLNMVTMMVETDDQSPEKVNIL
AKINLLFVAIFTGECIIKMTALRHYYFTNSWNIFDFVVVILSIVGTVLSDIIQKYFFSPT
LFRVIRLARIGRILRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMANFA
YVKWEAGIDDMFNFQTFANSMLCLFQITTSAGWDGLLSPILNTGPPYCDPNLPNSNGSRG
NCGSPAVGILFFTTYIIISFLIVVNMYIAIILENFSVATEESTEPLSEDDFDMFYEIWEK
FDPEATQFIEYSALSDFADALSEPLRIAKPNQISLINMDLPMVSGDRIHCMDILFAFTKR
VLGESGEMDALKIQMEEKFMAANPSKISYEPITTTLRRKHEEVSATIIQRAFRRHLLQRS
MKHASFLFRQQAGSSGLSDEDAPEQEGLIAYMMNENFSRRLGPPSSSSISSTSFPPSYDS
VTRATSDNPQMRVSDYSRSEDLADFPPSPDRDRESIV
NT seq
6054 nt
NT seq
+upstream
nt +downstream
nt
atggcagacttcctgttacctcggggcaccagcagcttccgcaggttcacccgggagtcc
ctggcagccatcgagaagcgcatggcggagaagcaagcccgaggctcggccgcctcacag
gagagccgggaagggctgcccgaggaggaggctccccagccccagctggacctgcaggcc
tccaaaaagctgccagatctctatggcaaccctccccgagagctgatcggggagcccctg
gaggacctggaccccttctatagcacccaaaagaccttcatcgtactgaataaaggcaag
accatcttccggttcagtgccaccaatgccttgtatgtcctcagtcccttccaccctgtc
cggagagcggctgtgaagattctggttcattcgctattcagcatgctcattatgtgcacc
atcctgaccaactgcgtgttcatggcccagcacgagcctcctccctggaccaagtacgtc
gagtataccttcactgccatttacacctttgagtctctggtcaagattctggctcgaggc
ttctgcctgcatgcgttcaccttcctccgggacccatggaactggctagacttcagtgtg
attgtcatggcatacacaactgaatttgtggacctgggcaatgtctcagctttacgtacc
ttccgagtcctccgggccctgaaaactatatcggtcatttcaggtctgaagaccattgtg
ggggccctgatccagtccgtgaagaagctggccgatgtgatggtcctcacggtcttctgc
ctcagcgtcttcgccctcatcggcctgcagctgttcatgggcaacctgaggcacaagtgt
gtccgcaacttcacagcactcaacgacaccaatggctctgtggaggccgacggcctggtc
tgggagtcactggacctctacctcagcgacccaggaaattacttgctgaagaacggcacc
tctgatgtgttactgtgtgggaacagctctgatgccgggacatgtcccgagggttaccgg
tgcctaaaggcaggggacaaccctgaccatggctacaccagctttgactccttcgcctgg
gccttcctggcactcttccgcttgatgacgcaggactgctgggagcgcctctaccagcag
accctgaggtctgcagggaagatctacatgatcttcttcatgcttgtcatcttcctgggc
tccttctacctggtgaacctgatcctggctgtggttgccatggcctacgaagagcaaaac
caagccaccattgctgagactgaggagaaggaaaagcgcttccaggaggccatggagatg
ctcaggaaagagcatgaggccctcaccatcaggggtgtggacactgtgtcccgcagctcc
ttggagatgtcccctttggccccagtaaccacccatgagagaagaagcaagaggagaaaa
cgaatgtcttcggggacagaagagtgtggggatgacaggttccccaagtccgactcggag
gatggtcccagagcaatgaatcgtctgagcagcatccacggcctcagcaggacctccatg
aagccgcgctccagccgcgggagcattttcacctttcgcaggcgagatctgggctcagag
acagatttcgcagatgacgaaaacagtacagcgggggacagcgagagccaccgcacgtct
ctgctggtgccctggcctctgcgccggcctagtgcccagggacagctcagtccagggacc
tcagctcctggccacgccctcaatgggaaaaggaacagcaccgtggactgcaacggggtg
gtctccttgctgggggcgggcgacgctgaggccacctccccagggagccacctcctccgc
cctgtgatcccggatcgccccccagacacgaccacaccatcggaggagccaggcaggccc
cagatgctgaacccccaggctccatgtatggatggcttcgaggagccaggagagcggcag
cgggccctcagcgcagtcagtgtcctcaccagcgccctggaagaactggaagagtctcac
cgcaaatgtccaccatgctggatccgctttgcccagcgctacctcatctgggagtgctgc
ccgctgtggatgtccatcaagcagaaagtgaagtttatggtcatggacccattcgctgac
ctcaccatcaccatgtgcatcgtgcttaacacgctcttcatggcactggagcactacaac
atgacaactgaatttgaggagatgctgcaggttggaaacctggtcttcacggggatcttc
actgcagagatgaccttcaagatcatcgctctggacccctactactacttccagcaaggc
tggaacatcttcgacagcatcattgtcatcctgagcctcatggagctgggcctgtcccgc
atgggcaacctatcagtgctgcgctccttccgcctgctgcgggtcttcaagctggccaaa
tcgtggcccaccctgaacaccctcatcaagatcatcggaaactcagtgggggcactgggg
aacctgacgctggtgctggccatcattgtgttcatcttcgccgtggtgggcatgcagctc
ttcggcaagaactactcagagcagaggtaccgcatcagtgactcaggcctgctgccccgc
tggcacatgatggacttcttccatgccttcctcatcatcttccgcatcctctgtggggag
tggatcgagaccatgtgggactgcatggaggtgtctgggcaatcactgtgcctgcttgtc
ttcttgcttgttatggtcattggcaaccttgtggtcctgaacctcttcctggctctgctg
ctcagctccttcagtgcagacaacctcacagcccccgacgacgatggggagatgaacaac
ctccagctggccctggcacgcatccaacgcggcctgcgcttcctcaagcggaccacctgg
gacttctgctgtgggcttctgcagcggcggccccagaagccggcagccctcgccacccat
ggccagctgcccagctgcattgccacctccagctccccaccgcctccagagtcagagaag
gcacctccggcccgcaaggagacacggtttgaggaagacaaacggccaggccagggcacc
cccggggatacagaacctgtgtgtgtgcccattgcagtggctgagtcagacacggatgac
caagaggaggatgaggagaacagcctgggcacagaggaagagtccagtaagcagcaggaa
tcccagcctgtttccggcagcccagaggccctcccagagcccagggcctggagccaggtg
tcagagactgcctcctccgaggccagtgtggctcaggcagactggcggcagcggcggaaa
ttggagcccccggccccagggtgcagtgagactcacgaggacagctactcggaggggagc
acagcagacatgaccaacactgctgacctcctggagcagatccctgacctgggtgaggat
gtcaaggatccagaggactgcttcactgaaggctgtgtccggcgctgtccttgctgcact
gtggacaccacgcagggcccagggaaggtctggtggcgactgcgcaagacctgctaccgc
atcgtggagcacagctggtttgagacgttcatcatcttcatgatcctgctcagcagtgga
gcgctggccttcgaggacatctacctggaggagcggaagaccatcaaggttctgctcgag
tatgccgacaagatgttcacctatgtctttgtgctggagatgctgctcaagtgggtggcc
tacggctttaagaagtacttcaccaacgcctggtgctggctggacttcctcatcgtggat
gtctccctaatcagcctggtagccaacaccctgggctttgccgagatgggccccatcaag
tcactgcggacgttgcgtgccctccgacccctgcgagccctgtcacgatttgagggcatg
agggttgtggtgaatgccctggtgggtgccatcccgtccatcatgaatgtcctcctcgtc
tgcctcatcttctggctcatcttcagcatcatgggtgtgaacctatttgcggggaagttt
gggcggtgcatcaaccagactgagggagacctgcctttgaactacaccatagtgaacaac
aaaagcgactgtgagtctttcaacgtgactggcgaattgtactggaccaaggtgaaagtc
aactttgacaacgtgggggccgggtacctggcccttctgcaggtggcaacatttaaaggc
tggatggacattatgtatgcagctgtggactccagggggtacgaagagcagccccaatgg
gaatacaacctctacatgtacatctacttcgtcattttcatcatctttggatctttcttc
accctgaatcttttcatcggtgtcatcatcgacaacttcaaccaacagaagaaaaagtta
gggggccaggacatcttcatgacagaggagcagaagaagtactacaatgccatgaagaag
ctgggctccaagaagccccagaagcccatcccgaggcccctgaacaagtaccagggcttc
ctgttcgacattgtgaccaagcaggccttcgacgtcaccatcatgtttctcatctgcttg
aacatggtgaccatgatggtggagacagatgaccagagccccgagaaggtcaacatcttg
gccaagatcaatctgctcttcgtagccatcttcacaggcgagtgtatcatcaagatgact
gccctgcgccactattacttcaccaacagctggaacatcttcgacttcgtggttgtcatc
ctctccatcgtgggtactgtgctctcagacatcatccagaagtacttcttctccccaacg
ctcttccgagtcatccgcctggcccgaatcggccgcatcctcaggctgatccgaggggcc
aaggggatccgcacgctgctctttgccctcatgatgtccctgcctgccctcttcaacata
gggctgctgctctttctggtcatgttcatctactccatcttcggcatggccaactttgct
tacgtcaaatgggaggctggcattgatgacatgttcaacttccagaccttcgccaacagc
atgctgtgcctcttccagatcaccacgtcagccggctgggatggcctcctcagccccatc
ctcaacacagggcccccttactgtgaccccaatctgcccaacagcaatggctcccggggg
aactgtgggagcccagccgtgggcatcctcttcttcaccacgtacatcatcatctccttc
ctcatcgtggtcaacatgtacatcgccatcatcctggagaatttcagtgtggccacagag
gagagcaccgagcccctgagtgaggatgacttcgacatgttctatgagatctgggagaag
ttcgacccggaggccacccagttcatcgagtattcggccctgtccgacttcgcagatgcc
ctgtccgagccgctccgcatcgccaagcccaaccagataagcctcatcaatatggacctg
cccatggtgagtggggaccgtatccactgcatggacatcctctttgccttcaccaagagg
gtcctgggtgagtctggggagatggacgccctgaagatccagatggaggagaagttcatg
gcggccaacccatccaagatctcctacgagcccatcaccaccacgctccggcgcaagcac
gaggaggtgtcggccaccatcatccagcgggccttccggaggcacctgctgcagcgctcc
atgaagcacgcctccttcctcttccgccagcaggcgggcagcagcggcctctctgatgag
gacgctcctgagcaagagggcctcatcgcctacatgatgaatgagaacttctcccggcgc
ctcggcccgccctccagctcctccatctcctccacgtccttcccaccctcctatgacagc
gtcaccagggccaccagcgataacccccagatgcgggtgtccgactacagccgcagtgag
gatctcgcggacttccccccgtccccagacagggaccgtgagtctatcgtgtga
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integrated database retrieval system