Ursus americanus (American black bear): 123796151
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Entry
123796151 CDS
T07931
Symbol
CHD5
Name
(RefSeq) LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding protein 5
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
uar
Ursus americanus (American black bear)
Brite
KEGG Orthology (KO) [BR:
uar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
uar03036
]
123796151 (CHD5)
Chromosome and associated proteins [BR:
uar03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
123796151 (CHD5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
PHD
DUF1087
Chromo
PHD-1st_NSD
HDA2-3
ResIII
PHDvar_NSD
HTH_Hrp3
DEAD
PHD_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
123796151
NCBI-ProteinID:
XP_045659477
LinkDB
All DBs
Position
Unknown
AA seq
1949 aa
AA seq
DB search
MRGPLGTEEELPRLFADEMENEDEMSEEEDGGLGAFDDYFPEEPVGLPKKKKSKKLKENR
PKGKRKKKEGSNDELSENEEDLEEKSESEGSDYSPNKKKKKKLKDKKEKKAKRKRKDDDE
DDNDDGCLKEPKSSGQLMAEWGLDDVEYLFSEADYHTLTNYKAFSQFLRPLIAKKNPKIP
MSKMMTVLGAKWREFSANNPFKGSSAAAAAAAVAAAVETVTIAPPLAVSPQQAPQPVPIR
KAKTKEGKGPGVRKKIKGSKDAKKKGKGRKVAGLKFRFGGISNKRKKASSSEEDEREESD
FDSASIHSSSVRSEGSTALGKKSKRRRKRKRIDDGDGYETDHQDYCEVCQQGGEIILCDT
CPRAYHLVCLDPELEKAPEGKWSCPHCEKEGIQWEPKDDDDEEEEGGCEEEEDDHMEFCR
VCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRCTCPPLKGKVQRILHWRWTEP
PAPFMVGLPGPDVEPGVPPPKPLEGIPEREFFVKWAGLSYWHCSWVKELQLELYHTVMYR
NYQRKNDMDEPPPFDYGSGDEDGKSEKRKNKDPLYAKMEERFYRYGIKPEWMMIHRILNH
SSDKKGDVHYLIKWKDLPYDQCTWEIDDIDIPYYVNLKQAYWGHRELMLGEDARLPKRLV
KKGKKLKDDKQEKPPDTPIVDPTVKFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTD
TILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTY
TGDKESRSVIRENEFSFEDNAIRSGKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIE
WACLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNN
LEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYY
KFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLV
KSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQ
EAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQN
KKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEEL
FKDDVEGMMSQGQRPVTPIPDVQSSKGGALAASAKKKHGSTPPGDNKDVEDSSVIHYDDA
AISKLLDRNQDATDDTELQNMNEYLSSFKVAQYVVREEDGVEEVEREIIKQEENVDPDYW
EKLLRHHYEQQQEDLARNLGKGKRVRKQVNYNDASQEDQEWQDELSDNQSEYSIGSEDED
EDFEERPEGQSGRRQSRRQLKSDRDKPLPPLLARVGGNIEVLGFNARQRKAFLNAIMRWG
MPPQDAFNSHWLVRDLRGKSEKEFRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHV
LTRIGVMSLVRKKVQEFEHVNGKYSTPDLIPEGPEGKKPSEVISSDPNTPVPASPAHLLP
APLGLPDKMEAQLGYMDEKELGVQKPKKPPEIQALPTAQDRVEGEDKHESSDGKERPEET
EKAPPSPEQLPREEVLPEKEKILDKLELSLIHSRGDGSDFRPDDTKVEEKEPIETQQNGD
KEEDEEGKKEDKNGKFKFMFNIADGGFTELHTLWQNEERAAVSSGKIYDIWHRRHDYWLL
AGIVTHGYARWQDIQNDPRYMILNEPFKSEIHKGNYLEMKNKFLARRFKLLEQALVIEEQ
LRRAAYLNMTQDPSHPAMALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLE
ELLSDMKADVTRLPSMLSRIPPVAARLQMSERSILSRLTNRAGDPTIQQGAFGNSQMYNN
NFGPNFRGPGPGGIVNYNQMPLGPYVTDI
NT seq
5850 nt
NT seq
+upstream
nt +downstream
nt
atgcggggcccgctgggcaccgaggaggagctgccgcggctgttcgcggacgagatggag
aacgaggacgagatgtcagaagaagaagatggtggccttggagcctttgatgactatttc
cctgaggagcccgtgggccttcccaagaagaagaaatccaagaagctcaaggagaaccgg
cccaaagggaagcggaagaagaaagaggggagcaatgatgagctgtcagaaaatgaagag
gatctggaagagaagtcggagagtgagggcagtgactactcccctaataaaaagaagaag
aaaaagctcaaggacaagaaggagaaaaaagccaagcgaaaaaggaaggatgatgatgag
gatgataatgatgatgggtgtctaaaggagcccaagtcctcggggcagctgatggccgag
tggggcctggatgacgtggagtacctgttctcggaggctgactaccacacgctgaccaac
tacaaggccttcagccagttcctcaggccgctcatcgccaagaagaacccaaagatcccc
atgtccaaaatgatgaccgttctgggagccaagtggcgggagttcagtgccaacaaccct
ttcaaggggagctcggcagcggcggctgcggcggcggtggccgcggccgtggagacagtc
accatcgcccctccgctggctgtcagcccccagcaggcaccccagcctgtacctatccgc
aaggccaagaccaaggagggcaaggggcccggagtgaggaagaagatcaaaggctccaag
gatgccaagaaaaagggcaaggggaggaaggtagccgggctcaagttccgctttggagga
atcagcaacaagaggaagaaagcctcctcgagcgaggaggatgagcgggaggagtccgac
ttcgacagcgccagcatccacagctcctccgtgcgctctgagggctccacagccctcggg
aagaagagcaagaggcggcgcaagaggaagaggattgacgatggcgatggctacgagacg
gaccaccaggactactgcgaggtgtgccagcagggcggggagatcatcttgtgtgacacc
tgcccgcgcgcctaccacctcgtctgccttgacccagagctggagaaggctcccgagggc
aagtggagctgtccgcactgtgagaaggaggggatccagtgggagccaaaggacgacgac
gacgaggaggaggagggcggctgcgaggaggaggaggacgaccacatggagttctgccgc
gtgtgcaaggacggcggcgaactgctctgctgcgacgcgtgcccctcctcctaccacctg
cactgcctcaacccgccgctgcccgagatcccaaacggtgaatggctctgcccgcgctgt
acttgccccccgctgaagggcaaagtccagcggatcctacactggaggtggacggagccc
cccgcccccttcatggtggggctgccggggcccgacgtggagcctggggtccccccaccc
aagcccctggagggcattccggagagagagttctttgtcaagtgggctgggctctcctac
tggcactgctcctgggtgaaggagctacagctggagctataccacacggtgatgtatcgc
aactaccaaagaaagaatgacatggacgagccgccgccctttgactacggctctggcgat
gaggatggcaagagcgagaaaaggaagaacaaggaccctctctatgccaagatggaggag
cgtttctaccgctacggcatcaagcccgagtggatgatgatccaccgcatcctgaaccac
agttcggacaagaagggggacgtgcactacctgatcaagtggaaagacctgccctatgac
cagtgcacctgggagatcgacgacatcgacatcccctactacgtcaacctgaagcaggcc
tactggggccacagggagctgatgctgggtgaggatgcccggctgcccaagaggctggtc
aagaagggcaagaagctgaaggacgataaacaggagaagccaccagacacacccattgtg
gatcccacggtcaagtttgacaagcagccttggtacattgactccacgggcggcacgctg
cacccgtaccagctggagggcctcaactggctgcgcttctcctgggcccagggcacagac
accatcctggctgacgagatgggtctgggcaagactgtgcagaccattgtcttcctttac
tccctgtacaaggaggggcactccaaggggccctacctggtcagtgcgcccctgtccacc
atcatcaactgggagcgtgagtttgagatgtgggcccccgacttctatgtggtcacctac
acgggggacaaggagagccgctccgtgatccgggagaatgagttttcttttgaggacaat
gccattcggagtgggaagaaggtgttccgcatgaagaaagaagtgcagatcaaatttcac
gtcctgctcacctcctacgagctcatcaccatcgaccaggccatcctgggctccatcgag
tgggcctgcctagtggtggacgaggcccaccggctcaaaaacaaccagtccaagttcttt
agggtcttgaacagctacaagatcgattacaagctgctgctgacggggaccccccttcag
aacaacctggaggagctgttccaccttctcaacttcttgacgccagagaggttcaacaat
ctggagggcttcctggaggagtttgctgatatctccaaggaagaccagatcaagaagcta
catgacctgctggggccacacatgctgaggcggctcaaggctgatgtattcaagaacatg
ccggccaagaccgagctgatcgttcgtgtggagctgagccagatgcagaagaagtattac
aagttcatcctcacgcggaacttcgaggcgctcaactccaaggggggtgggaaccaggtg
tcgctgctcaacatcatgatggatctgaagaagtgttgcaaccacccctacctcttcccc
gtggctgccgtggaggcccccgtcttgcccaacggctcctacgacggcagctccctggtc
aagtcttcaggcaagctcatgctgctgcagaagatgctgaagaaactgcgggacgaaggc
caccgtgtgctcatcttctcccagatgaccaagatgctggaccttctggaagacttcctg
gagtatgagggctacaagtatgagcggattgatggtggcatcactgggggcctccgacaa
gaggcgatcgacagattcaacgcccctggggcgcagcagttctgctttctcctctccacc
cgggcggggggcctgggcatcaacctggccacagcagacaccgtgatcatctacgactcg
gactggaatccacacaatgacatccaggccttcagccgcgcccaccgcatcggacagaac
aagaaggtgatgatctaccgcttcgtgacccgggcctcggtggaggagcgcatcacgcag
gtggccaagcgcaagatgatgctcacgcacctggtggtgcggcccggcctcggctccaag
tccggctccatgaccaagcaggagctggacgacatcctcaagttcggcacagaggagctc
ttcaaggatgacgtggagggcatgatgtctcagggccagaggcctgtcacacccatccct
gatgtccagtcctccaaagggggagccctggctgccagtgccaagaagaagcatggcagc
accccgccaggcgacaacaaggacgtggaggacagcagtgtgatccactatgacgatgcg
gccatctccaagctgctggacagaaaccaggacgccacggacgacacggagctgcagaat
atgaacgagtacctgagctccttcaaggtggcgcagtacgtggtgcgcgaggaggacggc
gtggaggaggtcgagcgggagatcatcaagcaggaagagaacgtggaccccgactactgg
gagaagctgctgcgacaccactacgagcagcagcaggaggacctggcccgcaatctgggc
aagggcaagcgcgtccgcaagcaggtcaactacaacgacgcctcccaggaggaccaggag
tggcaggacgagctctcagataaccagtctgaatattccatcggctccgaggatgaggac
gaggactttgaggaaaggcccgaagggcagagtggacggcgacaatccaggaggcagctg
aagagcgacagggacaagcccttgccacctcttcttgcccgtgtgggtggcaatatcgag
gtgctgggcttcaatgcccggcagcggaaggcctttctgaacgccatcatgcgctggggc
atgcccccccaggacgccttcaactcccactggctggtgcgggaccttcgcgggaagagt
gagaaggaatttagagcctatgtgtccctcttcatgcggcacctgtgtgagccgggggct
gacggcgcagagaccttcgcggacggcgtgccccgggagggcctctcgaggcagcacgtg
ctcactcgcatcggggtcatgtcactagttaggaagaaggttcaggagtttgagcatgtt
aacgggaagtacagcaccccggacttgatccctgaggggcccgagggcaagaagccaagc
gaggtcatctcctcggaccccaacacgccagtgcccgccagccctgcccacctcctgccg
gccccactgggcctgccagacaaaatggaagcccagctgggctacatggatgagaaggag
ctgggggttcagaagccaaagaagcccccagaaatccaggccctgccaactgcccaggac
agagtggagggcgaggacaagcatgagagctcagatggcaaggagcggccggaggagacg
gagaaggccccgccgtccccagagcagctgccaagagaagaagtgcttcctgagaaggag
aaaattctggacaagctggagctaagcttgattcacagcagaggggatggcagtgatttc
aggccagatgacaccaaagtggaggagaaggagcccattgaaacacagcaaaatggtgac
aaagaggaagatgaggaggggaagaaggaggacaagaatgggaagttcaaattcatgttc
aacattgcagatgggggcttcacagagctgcacacactgtggcagaatgaggaacgtgct
gctgtgtcctcggggaaaatctacgacatctggcaccgacgccatgactactggctgctg
gcgggcatcgtgacgcacggctacgcccgctggcaggacatccagaatgacccgagatac
atgatcctcaacgagcccttcaagtctgagatccacaagggcaactacctggagatgaag
aacaagtttctggcccgcaggttcaagctgctggagcaggccctggtcatcgaggagcag
ctccggagggccgcgtaccttaacatgacccaggaccccagccaccccgccatggccctc
aacgcccgcctggccgaggtggagtgccttgccgagagccaccagcacctgtcgaaggag
tccctcgctgggaacaagccggccaatgctgtcctacacaaggtcctgaaccagctggag
gagctgctgagtgacatgaaagcagacgtgacgcgcctgccctccatgctgtcccgcatc
ccccccgtggccgcccgcctccagatgtcggagcgcagcatcctgagccgcctgaccaac
cgagccggcgaccccaccatccagcagggcgctttcggcaactcccagatgtacaacaac
aactttgggcccaacttccggggccctggaccgggagggattgtcaactacaaccagatg
cccctggggccctatgtgaccgatatctag
DBGET
integrated database retrieval system
