Uloborus diversus: 129225121
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Entry
129225121 CDS
T09235
Name
(RefSeq) CCR4-NOT transcription complex subunit 1-like
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
udv
Uloborus diversus
Pathway
udv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
udv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
129225121
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
udv03019
]
129225121
Messenger RNA biogenesis [BR:
udv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
129225121
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
129225121
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
DUF2891
Motif
Other DBs
NCBI-GeneID:
129225121
NCBI-ProteinID:
XP_054715657
LinkDB
All DBs
Position
6:complement(76199488..76291283)
Genome browser
AA seq
2075 aa
AA seq
DB search
MMSRSHMGLTDAVPVQNLNSNNMIIWNENKEKSDGNQHPTWNIEIFVQVIHEMAPSLDWK
EVIHELDNPGFLLKDRKSFKLLWQALMLGLNHETFPMDRMYRRWRHTEGQFTFFQQALNC
SDLVCLTDYAHRPVLTDALKAPPEDDNRSISNWKSLDLIETLLYLSESPYFKEELFKFPV
AHCPDLLILGLIQTSKTINHLHKELLSTLIPIFLGNHPNSAMVLHLAWHSQYHSTAIRNI
IMHAMADWYVRGEGDQTRLSRILDVAQDLKALSMLLNLTPFLFVIDLACLASRREYLKLD
KWLGDKVREHGEAFIQASLNFLNRRCPQIMGGSIKEENLPKTALPAETLATILSLLQSLV
GSISQELSETILTMVGNCGVVLNKNRLPPPGVVKTSQGTLQSVMSPSVITPNSSLEQLGS
LTSSVSALTLSNNVKAISSVNSAFPLAGSLSSLSIPSSGSPAKILSVVTPSTPAVSSVSQ
ITQNSFPGGGMSSASTQLPGQFSSQLGGDFGAIFPDASQPVSKEIEDEANGYFQRIYNHS
PHSSLPIEDVLDMLKRFQDSPIKREREVFNCMIRNLFEEYRFFPQYPDKELITTAQLFGG
IIDQNLVSYITLGLALRYVLESLKKPHGSKMFYFGVTAMDRFKTRLKDYPQYCQHLTSTP
NFHELPHQLIEYIEYGARSQEPPNRPQGPIIPQSLSVASAFPALTQTPALPLTTTVTVTV
TTVSTKTTIAGKPSIANATNIDTLLVATEKDEKLVVPPEAVQDKVAFIVNNLSQSNLTQK
TDEFREIVKDEYWPWASQYLVMKRASIEPNFHSLYSNFLDTCKLNDLTKLVIRETFRNIK
VLLRSDKGIANFSDRSLLKNLGHWLGMLTLAKCKPILHIDIDVKSLLIEAYHNGQQELLY
VVPFVAKVLESCSKSKVFKPPNPWTMGIMNVLGELHQEPDLKLNLKFEIEVLCKTLSIDI
NDLKPGNILKDQERYLKIEPQLSPLPKHKEQQVITAVNIQVPQQPSLGAVLAAPPNPIPN
NVLHEENLQNVSINNSPPATIQAAPLAPLSTTMPQPQFSYGDINILSTNHLNQHLLINTQ
IPLFQAHNQLKQCVRLAVERAVQEWMVPVVDRSIKISLTTCEQIIKKDFALDPEESRMRV
SAHHMVRSLTAGMVMITCRDPLFVTILTNLRNAFLATLRNATPQQKEMTDQAAEIVARDN
LELACCFIQKTAVEKALPEIDKRLSSEYEARKHARSEGRRYCDPMALTYQAERMPEQIRL
KVGGVTPQQMGVYEEFARMIPGFLPNGEREQTNSFINKPVAIMTPYSATDEITQIYDKLI
SELEILVHGIIAPGNPHLTALHNLLDAVLVARSSRELPSAVSLLQKAVDGFLEGMCQVAG
DNEIMLRFRDGHLLVLKALADPRMYGHQWTSKQVTRWLMESRDECRYNPESVDLLIRNHL
INLQAYDLHLTQSMENGMNPIAVNFAMQLAKLYLLDERQSGLVSEVDLYNTVETLARIAT
LPRQLPEGLPQLLDMLRTTGDPTFLDRAPGGGPMSMMYSGITQAREFDDPPGLYEKTEFL
LREWVNMFHAPNAGRDSTKAFSLFVHQMNLQGILKTDELITRFFRLSTEMCVDLCYRVLI
DQSLKSPTVIRAKCFHTLDAYVRLIALLVKHSGDASNTITKVNLLNKVLGIVTGVLLQDQ
ELRGVDFQQLPYHRIFIMLFLELSAPESVLEAISTQIMTAFCNTLYYLRPQKAPGFAYAW
LELVSHRVFLGRVLALSAAQKGWTMYAQLLISLFKFLAPFLRNVELAAPIQLLYKGTLRV
LLVLLHDFPEFLCDYHYGFCDVIAPNCIQMRNLILSAFPRNMRLPDPFTPNLKVDLLPEI
TQAPRILANFNNLITPATFKKDLDSYIKTRAPVTFLSELRTSLQVSNEPGVRYNIPLINA
LVLYVGTQAISYIQSKGSTPNMSTITHSSHMDIFQNLAVDSDTEGRYLFLNAIANQLRYP
NSHTHYFSCTLLYLFAEANTEAIQEQITRVLLERLIVNRPHPWGLLITFIELIKNQTFKF
WNHEFVRCAPEIEKLFESVARSCMHPKPSSEQTNS
NT seq
6228 nt
NT seq
+upstream
nt +downstream
nt
atgatgtctagatctcatatgggcttgactgatgctgttcctgttcagaacttaaatagc
aataacatgatcatatggaatgaaaataaagaaaaatctgatggaaatcaacaccctaca
tggaacatagaaatttttgttcaagttattcatgaaatggctccatccttagattggaaa
gaagttattcatgaacttgataatcctggctttctcctaaaagataggaaaagttttaaa
ctactttggcaagctttaatgctaggacttaatcatgaaacatttcctatggataggatg
tacagacgatggaggcatactgaaggacagtttacatttttccaacaagctttaaattgc
tctgaccttgtgtgcttaactgactatgctcaccgtcctgtcttaacagatgccttaaaa
gctcctcctgaagatgacaaccgaagtatctcaaattggaaatctttggatttaattgaa
acattgttatatttgtctgaatctccatattttaaagaagagctttttaaatttccagta
gctcattgtccggacctcctcatattagggctcatccaaacatctaaaacaataaaccat
cttcacaaagaactgttgtcgacattaataccaatatttcttggaaatcatcccaattct
gctatggtattacatcttgcatggcatagtcagtatcactctactgccataagaaatatc
ataatgcatgccatggctgattggtatgtaagaggagaaggagaccaaacccgtctttca
aggatacttgatgtagcacaagatttaaaggcattgtcaatgcttcttaacttgacaccg
tttctgtttgtcatagatttagcttgtttggcttctagaagagaatacttaaagttggat
aaatggcttggagataaagttagagagcatggtgaagcttttattcaagcatctcttaac
ttcttaaatcggcgttgtccccaaattatgggtggaagcatcaaagaagaaaatctgcct
aaaactgcattgcctgctgaaactttagcaacaatattaagtttacttcaaagtttagtt
ggttctatatctcaagaattatcagagactattttgaccatggttggaaattgtggtgtt
gttttaaataagaacagattaccacctcctggtgttgttaaaacttcacagggtacttta
cagtcagtcatgtctccctctgtgatcactccaaattcaagtttggagcagttgggtagt
ttgacatcatccgtctcagcacttacattaagtaataatgtgaaagctataagcagtgta
aattcagcatttccattagctggatccctaagctcactttcaattccatcatctggatcg
cctgctaagatattatcagttgttacaccgtcaacacctgctgtttcatctgttagtcaa
ataacgcaaaattctttccctggtggtggcatgtcgtctgcatcaacccagttacctggg
cagttcagttcacagctgggcggagattttggagcaatttttccagatgcgagccagccc
gtttccaaagaaatagaagatgaagcaaatggatacttccaacggatttataatcattcg
ccacattcctctctccctattgaagatgttctagatatgttaaaaaggtttcaagactct
ccaattaaaagagagagggaggtgtttaactgtatgattagaaatctgtttgaagagtac
agatttttcccacaatatcctgacaaagaattaattactacagcccaactgtttggtgga
ataatagaccagaatcttgttagttacatcactttgggcctggcgctcagatatgtattg
gagtcgttaaaaaaaccacatggaagtaaaatgttctactttggagtcaccgccatggac
agatttaaaactagattaaaagattatcctcagtattgtcagcatttgacatcaacacca
aattttcatgaacttcctcatcaattaatagagtatattgaatatggtgcaagatctcag
gaacctcctaatcgacctcaagggcctattataccccaaagtttaagtgttgcatcagca
tttccggccttaactcaaacaccagcattacctcttacaacgactgtaaccgtcacagtc
acaactgtttcaactaagaccactattgctggaaagccatcaattgccaatgcaacaaat
attgatacactacttgtggccacagaaaaagatgaaaagttagtagttcctcctgaagcc
gttcaggacaaagtagcttttattgtgaataatttgtctcaatctaacctaacccaaaag
actgatgaatttagagaaattgtgaaggatgaatattggccctgggcgtctcaatatcta
gtcatgaaaagagcttcaattgaaccaaatttccactccttatattccaatttcttagat
acatgtaagctaaatgatctcaccaaacttgtgattagggagacttttcgcaatattaag
gtattacttcgaagtgacaaaggaattgctaatttttcggacaggtctttactgaaaaat
ttaggacattggttgggcatgcttacactagccaaatgcaaaccaattttgcacattgat
atagatgtaaagtcactgttgattgaagcctaccataatgggcaacaagagctgttatat
gttgtaccattcgtagcaaaagttctggaatcatgttcgaagagcaaagtatttaagccc
ccaaatccatggactatgggaattatgaatgttttaggagaactacatcaagaaccagat
ttaaaattaaatctgaagtttgaaattgaagttctttgcaaaacattgagcatcgatatt
aacgatttaaaacctggtaatatacttaaagaccaagaacgttacttgaaaattgagcca
cagctgtcaccattgccaaaacataaagaacagcaagttataactgcagtaaacatccaa
gttcctcagcagccttctcttggagcggtacttgcagctcctcccaatcctattcctaat
aatgttttacatgaagaaaacttacaaaatgtatctattaataatagccctcctgcaact
attcaggctgctccacttgcaccattgtcaacaacaatgcctcagcctcagttttcatat
ggagacattaatattttatctactaatcatttgaatcaacatttactcatcaatacacag
attcctctgtttcaagctcacaatcagttgaaacagtgtgttagacttgctgttgaaaga
gctgtgcaagaatggatggttccagttgttgatagatccatcaaaatttctctgacaact
tgtgagcaaatcattaaaaaggattttgcactggatccagaagaatcacgtatgagggtt
tcagcacatcacatggttcggagcttaactgctgggatggttatgataacatgtagagac
cctttatttgtaactattttaacaaacctgcgtaatgctttcttggcgacattacgtaat
gctactcctcaacagaaagaaatgacagatcaagctgctgaaatagttgcacgtgacaat
ttagaacttgcatgctgttttatacaaaaaactgcagttgagaaggctctgccagaaatt
gataaaagattaagttctgaatatgaagcacgtaaacatgcaaggagtgaaggtagaagg
tattgtgatcctatggcattaacttatcaagctgaaagaatgccagaacaaattagactg
aaggttggtggtgttactccccaacaaatgggtgtatatgaagaatttgcacgaatgatt
ccaggattcttgccaaatggtgaaagagaacaaactaacagctttataaacaagccagta
gctattatgacaccttattctgctacagatgaaatcacacaaatatatgacaaattaatt
tctgaactagaaatattagttcatggaattattgcacctgggaatccacatttaactgcc
ttgcacaatttacttgatgctgtacttgtagcaagatcatcccgagaattaccatctgca
gtttctttattgcaaaaagcagttgatggttttctagaaggaatgtgtcaagttgcagga
gacaacgaaattatgttacgctttagagatggacacttgttagtattgaaagctcttgct
gatcccaggatgtatggacatcagtggactagcaagcaagttacacgttggttgatggaa
agtagagatgaatgtagatataatcctgagtcagttgatcttttaatccgtaatcacctc
ataaatctgcaagcatatgatttgcatcttacccagtcgatggaaaatggaatgaatcca
attgctgtaaattttgctatgcaactagctaaattgtaccttttggatgaaaggcaaagt
ggtttggtgtcagaagttgatttatataatacagtagaaacattagcacgtattgctaca
cttccgcgtcaacttcctgaagggcttcctcagctgttggatatgcttaggacaaccggt
gatccaacttttttagatcgtgctcctggtggaggacctatgtcaatgatgtattctggg
attactcaagctcgagaatttgatgatccccctggtttatatgagaaaactgagtttctt
ctcagagaatgggttaatatgtttcatgctccaaatgcaggaagagacagtactaaagca
ttttcgctttttgtccatcaaatgaatttgcaaggtattttaaagactgatgaactgatt
actcgattttttcgtttaagtacagaaatgtgtgtcgatctttgttatcgagttctgatt
gatcagagcttgaaatctccaactgttattcgtgcaaaatgctttcatactctggatgct
tacgttcgcctaatcgctcttctagtaaaacacagtggtgatgctagcaatacaattacc
aaagtcaatttgttgaataaggtgctaggcattgttactggtgttcttttgcaagatcaa
gaattacgaggagttgattttcagcagctgccttatcataggattttcattatgttattt
ttggaactcagtgctccggagtctgttttggaagctataagcactcagataatgacggca
ttttgcaatacactgtattacttgcgacctcaaaaagctcctggctttgcttatgcttgg
ttagagcttgtctcacatagggtatttcttgggagagtgttagctctatctgctgcccaa
aaaggttggacaatgtatgctcaacttctgattagtctgttcaagtttttggctcctttt
cttcgaaatgttgagcttgctgctccaattcagttactgtacaagggaactcttagagtg
ctattggtgctacttcatgactttcctgaatttctctgtgattatcattatggattttgt
gatgttattgctcccaattgcattcaaatgcgaaatcttattttaagtgcttttccgaga
aatatgaggttgcctgatccttttactcctaatctcaaagttgatttattaccagaaatc
acacaagccccaagaattcttgccaattttaacaatctgatcacaccagcaacttttaaa
aaggatttggattcttacataaaaacaagagctcctgttactttcctctcagaattaaga
acaagccttcaagtttcaaatgagcctggagtgcgatacaacatcccactgataaatgct
cttgttctttacgttgggacgcaggcaataagttatatccaaagtaaaggttcaacgcct
aatatgagtaccattacccattcatcacacatggacatttttcaaaatttagctgttgat
tctgatactgaagggaggtatttatttttaaatgcaattgcaaaccaactgaggtatcca
aatagccatactcattatttcagctgtacgctactatatttgtttgctgaagctaataca
gaagccattcaagagcaaatcacaagggttctattagaacgactgattgtaaatagacct
catccatggggtttgttaataacttttattgaattgattaaaaatcaaacttttaaattt
tggaatcatgaatttgttagatgtgcacctgaaattgaaaagctctttgaatctgttgct
agatcatgtatgcatccaaaaccttcatctgaacaaacaaactcatga
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