Ustilago maydis: UMAG_04275
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Entry
UMAG_04275 CDS
T01021
Name
(RefSeq) hypothetical protein
KO
K08736
DNA mismatch repair protein MSH3
Organism
uma
Ustilago maydis
Pathway
uma03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
uma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
UMAG_04275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
uma03400
]
UMAG_04275
DNA repair and recombination proteins [BR:
uma03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
UMAG_04275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
Motif
Other DBs
NCBI-GeneID:
23564507
NCBI-ProteinID:
XP_011390736
UniProt:
Q4P6I8
LinkDB
All DBs
Position
12:complement(556736..560200)
Genome browser
AA seq
1154 aa
AA seq
DB search
MPPPPSQKPGQASISAFFKPKSSQRPITKSCQPDRAQVSNGYARTSNLLDTDTGASSSAQ
PPHKRSKLNNKDGPRRETIDRMSKWKFTALQPSDNVSSELDEAASQATPTERSQHDQARH
DAFRKTLLGPNFAIDRHASNQMQIDDMSSAHTFSHSESRTSTGTKVDAMVVDDDDDDDDN
QHEQAAQSVPGTWNRFTGLAAPESTPAPCSHRDSSMNKTKGKPKASGAGTGPSYTPLEKQ
ILELKAEHPGVLLIIEVGYKLKFYGEDARIASKELSIMCFPERNLLTAMIPVHRLHIHVK
RLIQAGHKVGVVRQIETRALKAASKNAYTPFVRKLTALYTASTWVDDLSSLDDLAANMGD
AYTNQPKSLMAIVEQSERGNAQADRVSIGIVSVEVNTGHLTYDQFSDGHARSELETRIAH
LAPAEVLIPPQLTKPTEKVISYLLGNGADGGVRIERLAAMPDYNQAFQSVTRFYRDRGLE
SPEVPEVPEVPGSSEADTTRLATTLADGADKRSSPLISLIVSLPQLSLIALAQIIQHLQA
FQLESICTLSTNFRSFSSRTTMLLNSNTLANLEIFRTANEQTERGSLIWLLDKCKSAMGR
RLLRKWVSRPLTDIDKLQERLDAVEALRDGKSYVLRRLDSVLHGLPDLERGLARMTYGRA
TPTELATVLLSLNRVTQEFKADEAATWKTQSSLIDTHLLSLASGKQVVQTYLNQISIKEA
RANNKADLYLDADVFPAIQASKDNMAIIDGELREHLREIRKLLHRPSLDYVSVAGVDYLV
EVRVADAKKVPVEWLRVSATKSMVRFHTPEVMRLSKIRDQHKETLDAAAQEAFARFVREL
CKSEYVVLRNVVASLAVLDVLLSLAHVARAAGYTRPVFLRQPQDAEASVPVEIIGMRHAI
LEVVSAMPYIPNDVSLSTGDSGAAILLSGCNMGGKSSVVRALGLVIIMAQIGSFVAADVA
RIGVHDAVYVRMGARDRMFSGRSTYMVEVSETADILGSLTSRSMVILDELGRGTSSRDGY
CLAAGVLEYLLTLGCPPNTVFITHYLQLASMQRRYPHLRNMHMAFTSNSRNLLDPIHLVY
KLRPGIAHSFGIHAAHLARLPLQIIHSASTISSALYAKHTNRSAFLVLKHAFANPPQLAT
VSTLQHLLFTHPPT
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atgccgccaccaccctcgcagaagcctggtcaggccagcatcagcgccttcttcaaaccc
aagtcgagccagcgccccatcaccaagtcttgtcaaccggaccgtgctcaggtcagtaat
gggtatgcaagaacctcaaacttgctcgataccgatactggcgcttccagttcagctcag
cctccacataagcgctccaagttgaacaacaaggacggacctcgtcgcgaaacaatcgat
cgtatgagcaaatggaagtttacagcgctccagccatctgacaacgtgtcctccgagcta
gatgaggctgcctcgcaagcaacgccgactgaacgctcacagcacgatcaagctcgccat
gacgctttccgcaagacgctgctgggccccaactttgcgatcgatcggcatgcaagcaac
caaatgcagatcgacgacatgtcgagtgcgcacaccttctcgcatagcgagtccagaacc
agtactgggaccaaggtggatgctatggtcgttgacgacgacgacgacgacgacgacaac
caacacgaacaagccgcgcagtcagtacctggcacttggaaccgttttacaggacttgct
gctcccgagtcgacacctgccccttgctctcatcgagacagctcaatgaacaagacaaag
ggcaaaccaaaagcctccggagccggtacaggccccagctataccccactcgaaaagcag
attctcgaactcaaagccgagcaccctggcgtcctgctcatcatcgaagtcggctacaag
ctcaaattctatggcgaggatgcacgcatcgcgtccaaagagctcagcatcatgtgcttc
cccgaacgcaatcttctcaccgccatgatacccgttcatcgtctgcatattcatgtcaag
cgtctcattcaagcaggtcacaaggtcggcgttgtgcgtcagattgaaactcgcgcactc
aaggctgcctcgaaaaacgcctacacaccttttgtccgcaagctcacagcgctctacact
gcaagcacatgggtcgacgacctgtcaagcctagacgatttggccgcgaacatgggagat
gcgtacacaaaccagccaaagagcctcatggccatcgtcgaacagtccgagcgtggcaac
gcgcaggcagacagggtcagcatcggcatcgtcagcgtcgaggtgaatactggtcatctg
acctatgaccaattttcggatggtcacgcgaggagtgaactcgagacgaggatcgcccac
cttgcgcctgctgaggtgctcatcccaccccagctcaccaaacccacagagaaagtcatc
tcgtatctgcttggtaacggtgcagacggcggggttaggattgaaagacttgctgccatg
ccggactacaaccaagcttttcagtccgtcacgcgtttctaccgtgatcgagggctcgag
tcccccgaggtacccgaggtacccgaggtacccggcagttcagaggcggataccacgaga
ctggcgacgacgcttgcagacggtgcagacaaaaggtcgagtccgttgatctcgctgatc
gtgtcgctcccgcaactctcgcttatcgctctggcccaaatcatccaacatctgcaagcg
tttcaactcgaatccatctgtacgctgtcgaccaactttcgctccttttcatcgcgcacc
acgatgttgctcaacagcaatacgcttgccaatcttgaaattttccggacggccaacgag
cagactgaacgtggcagtctgatctggctgctcgacaagtgcaagagcgccatgggcagg
aggctgctgcgcaagtgggtctcgcgacccttgaccgacattgacaagctccaagaacgg
ctcgacgcggtggaggcgcttcgagacggcaagagctacgttctgaggcgactcgatagc
gtgctgcatggactcccggatttggaaagagggctagcgcgcatgacgtacggccgtgcg
acacctacggagctcgccacggtcttgctctcgctaaaccgagtgacgcaggagttcaaa
gcggacgaggcagccacttggaagacacagtcgtcactcatcgacacacatctgctctca
cttgcatcgggaaagcaagtggtgcagacctatctcaaccagatctcgatcaaagaagcg
cgcgccaacaacaaagcggacctgtatctggatgcggatgtgttccctgcgatccaagca
tcgaaggacaacatggcgatcatcgatggcgagctgcgcgaacatctgcgcgagatacga
aagctgctgcaccggccgagtctggactacgtgagcgtcgcgggtgtcgactatctagtc
gaggttcgagtggccgacgcgaaaaaggtgcctgtggaatggctgcgtgtgagcgcgacg
aaatccatggttcgcttccacacacccgaggtgatgcgcttgtccaagattcgcgatcag
cacaaggagacgctggacgccgctgctcaagaggcgtttgcgaggtttgtgcgcgaattg
tgtaagagcgagtacgtggtgttgcgcaatgtggtggcgagtttggctgtgttggacgtg
ctgctttcgctagcgcacgtggcgcgtgcggctggatatacacggccggtgtttttgcgc
cagcctcaggacgcggaggcgtcggtgccggtcgagatcataggtatgcgacatgcgatt
ctggaagtggtgtcggctatgccatatattccgaatgatgtgagtctgtctactggtgat
tcgggagcggcgatcttgttgagcgggtgcaatatgggcgggaagtcgtcggtggtgcgt
gcgctggggttggtgataataatggcgcagattgggtcgtttgtggctgcggacgtggct
aggatcggggtgcatgatgcggtgtatgtgcgtatgggagctcgcgatcgtatgttttcc
gggcgcagtacgtatatggtagaagttagcgagacggctgatatccttggctcactgacg
agtcgcagtatggtgatacttgatgagttagggcgcggtacatcgtctcgcgatggctac
tgtcttgcagccggggtgcttgagtacctgctcacacttggctgtcctccgaatactgtc
tttattacgcactacctgcagcttgcgagcatgcaacgtcggtatcctcatctgcgcaat
atgcacatggcgttcacgtcgaattccagaaatctcctggatcccatccacctcgtctac
aaactgcgtcccggtatcgcgcactcgttcggcattcacgccgcccacctagcacgtctg
cccctccagatcatccattccgcttccaccatctccagcgccctctatgccaaacacacc
aaccgatccgctttcctcgtcctcaaacacgcctttgccaatccaccccagcttgccacc
gtatctaccctccaacacctcctctttactcaccctcccacttag
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integrated database retrieval system
