KEGG   Umezawaea sp. Da 62-37: RM788_50665
Entry
RM788_50665       CDS       T09853                                 
Name
(GenBank) RICIN domain-containing protein
  KO
K01051  pectinesterase [EC:3.1.1.11]
K01728  pectate lyase [EC:4.2.2.2]
Organism
ume  Umezawaea sp. Da 62-37
Pathway
ume00040  Pentose and glucuronate interconversions
ume01100  Metabolic pathways
ume02020  Two-component system
ume02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:ume00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    RM788_50665
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    RM788_50665
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    RM788_50665
Enzymes [BR:ume01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.1  Carboxylic-ester hydrolases
    3.1.1.11  pectinesterase
     RM788_50665
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.2  pectate lyase
     RM788_50665
SSDB
Motif
Pfam: RicinB_lectin_2 Ricin_B_lectin Pectate_lyase_4 CDtoxinA Beta_helix NosD
Other DBs
NCBI-ProteinID: WNV86295
LinkDB
Position
11313506..11314939
AA seq 477 aa
MSPLKSGKPVRALLAAVITLAAVAAAPSSAQAATPVAGATYQVSVTRSGKCLDVVAGSTA
NGALVQQWGCSGDSWQRFTLNTAASGTYTLTNGNSGRCLDIPSGTTESGVQLQQWGCSGA
ANQQWRLVASGSGTYQVVNAASGLCLANKDASTVSGAAIIQEACTANTNKQWLFSPVGGR
TWAGAADGFAGTDGGTTGGAAGPTVTVTTYADLVRYATASTPYVIRVGGAVTATPYGTEL
KVASDKTIVGVGTAGHIVNGGFFLGVGVHNVIIRNLTVRDTLMASDDPDDKDFDYDGVQM
DGAHHVWIDHNTITRMNDGLIDSRADTSHLTVSWNVLAQNNKTFGIGWTTNVTSRMTIHH
NWFRDTNQRNPSTDNVAYAHLYNNYLQNIKSYGNYARGATRMVLENSYFENVKDPYYKDD
AAQLRQSGSVVVSSTGRLESGGTAFTPSAFYAYTLDPAANVPSLLRAYSGPQANIGA
NT seq 1434 nt   +upstreamnt  +downstreamnt
atgagccccctcaagagcggaaaacccgtgcgggcactcctcgccgccgtcatcaccctg
gccgcggtcgccgctgccccgtcgtcggcccaggccgcgaccccggtcgcgggcgccacc
taccaggtcagcgtcacgcggagcggcaagtgcctcgacgtggtcgcgggctccaccgcc
aacggggcgctggtacagcagtggggctgttccggcgactcgtggcagcggttcaccctc
aacaccgcggcctcgggcacgtacacgctgaccaacggcaacagcggcaggtgcctggac
atcccgtccggcaccactgagtcgggtgtgcagttgcagcagtggggttgcagcggtgcc
gccaaccagcagtggcggttggtggcgtcgggttccggcacctaccaggtcgtcaacgcg
gccagcggtttgtgcctggcgaacaaggacgcgtccacggtgtccggtgcggcgatcatc
caggaggcgtgcaccgccaacaccaacaagcagtggctgttcagcccggtcggcgggcgg
acgtgggcgggcgcggcggacgggttcgcgggcacggacggcggcacgaccggtggcgcg
gccgggccgacggtgaccgtcacgacctacgccgacctggtccggtacgcgacggcgagc
acgccctacgtgatccgggtcggcggggccgtgaccgcgaccccgtacggcaccgagctg
aaggtggcgtcggacaagaccatcgtcggcgtcggcacggccgggcacatcgtgaacggc
gggttcttcctcggcgtcggcgtgcacaacgtgatcatccgcaacctcaccgtccgcgac
accctcatggcgtccgacgacccggacgacaaggacttcgactacgacggcgtccagatg
gacggcgcgcaccacgtgtggatcgaccacaacacgatcaccaggatgaacgacggcctc
atcgacagcagggcggacaccagccacctgaccgtgtcgtggaacgtgctggcgcagaac
aacaagacgttcggcatcggctggaccaccaacgtcacctcgcggatgaccatccaccac
aactggttccgggacacgaaccagcgcaaccccagcacggacaacgtcgcctacgcgcac
ctctacaacaactacctccagaacatcaagtcctacggcaactacgcccgcggcgccacg
aggatggtgctggagaactcgtacttcgagaacgtgaaggacccgtactacaaggacgac
gccgcccagctccggcagtccggcagcgtcgtggtgagttcgaccggtcggctggagtcg
ggcggcacggcgttcaccccgagcgcgttctacgcctacaccctcgacccggccgcgaac
gtcccgtcgctgctgcgcgcctactcggggccgcaggcgaacatcggagcctga

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