Undibacterium parvum: EJN92_16725
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Entry
EJN92_16725 CDS
T05754
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
upv
Undibacterium parvum
Pathway
upv03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
upv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EJN92_16725 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
upv03400
]
EJN92_16725 (uvrB)
DNA repair and recombination proteins [BR:
upv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EJN92_16725 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EJN92_16725 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
DEAD
UVR
Kinesin
AAA_30
Microtub_bd
UB2H
Motif
Other DBs
NCBI-ProteinID:
AZP13483
UniProt:
A0A3Q9BSF8
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All DBs
Position
3821223..3823319
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AA seq
698 aa
AA seq
DB search
MADLTQISGAADEPKFVTFPDSPYQLCQLFPPAGDQPAAIAQLVEGINDGLFFQTLLGVT
GSGKTYTMANVIARTGRPAIIFAPNKTLAAQLYSEFREFFPRNAVEYFVSYYDYYQPEAY
VPQRDLFIEKDSAINEHIEQMRLSCTKSLMERRDVIIVATVSAIYGIGNPKEYHKMILTL
RAKDKVSQRDLIARLIQMQYTRNEIDFSRGTFRVRGDTIDIFPAEHAELALRVEMFDDEI
ENLQLFDPLTGRVKQKIPRFTVYPSSHYVTPRETVLRAVETIKIELRERLEFFRRENKLI
EEQRIEQRTRFDLEMMAEIGFTKGIENYSRHLSGALPGEPPPTLVDYLPADALMFLDESH
VLTGQLNAMYNGDRSRKTNLVDYGFRLPSALDNRPLKFEEFESKMRQTVFVSATPAEYER
THADQVVEQVVRPTGLVDPRIEVRPALTQVDDLMQEITARVKLHERVLVTTLTKRMSEQL
TEFLSDNGIKVRYLHSDIDTVERVEILRDLRLGTFDVLVGINLLREGLDIPEVSLVAILD
ADKEGFLRSERSLIQTIGRAARNLNGTAILYADRITDSMRRAIDETERRRNKQIAFNLEN
NITPTGIKKKIKDIIDGVYNPQEAREELAVAQEQAKYEMMSEKQISREIKKLEKLMMDHA
KNLEFEKAGMVRDQLAHLKQQLFGADGKDNLAALSARL
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atggctgatttaacacagatatcgggtgcggcagatgagccgaagttcgttactttcccg
gattcaccttatcaattatgtcaattatttccccctgcaggagatcagccggcggcgatt
gcgcaactggttgaggggattaatgacggcttatttttccagactttgctgggtgtgacg
ggctctggtaaaacctatacgatggccaatgtaatcgcccgtaccggtcgaccggcaatc
attttcgctccaaataagactttggcggcgcagttatatagtgaatttcgtgagtttttt
ccgcgcaacgcagtcgagtatttcgtcagttactacgattactaccagccggaagcgtat
gtgccgcagcgtgatttgttcattgagaaagactctgcgatcaatgagcatatcgagcaa
atgcgtctgtcttgtacaaaatcactgatggagcgacgtgatgtgatcatcgtggcgacg
gtatcggcgatttacggtattggtaatcccaaggagtatcacaagatgatactgaccttg
cgcgccaaggataaggtcagtcagcgtgatttgatcgcacgcttgatacagatgcaatac
acgcgcaatgaaattgattttagccgcggtactttccgtgtacgtggcgataccatcgat
attttcccggccgaacatgctgaactggcactacgggtggagatgtttgatgatgagatc
gaaaacttgcagctgtttgatccgctcaccgggcgggttaagcaaaaaatcccccgcttt
acggtttatccaagctcacattatgtgactccgcgtgagacggtattgcgggcagtggag
actatcaaaatagagttgcgtgaacgactggagtttttcaggcgcgagaataagttaatc
gaagagcagcgcatagagcagcgcacccgtttcgatctggaaatgatggcggagattggc
tttactaagggcatagaaaactattcgcgtcatttgagtggtgctttgccgggtgagccg
ccgccaaccctggtcgattatttgccggccgacgccttgatgtttctcgatgagtcgcat
gtcttgactgggcaattgaatgccatgtacaacggcgaccgctcgcgcaaaaccaatttg
gtggattacggctttcgcctgccgtcggcgctggataatcgtccgcttaagtttgaagag
ttcgagagcaagatgcgtcagactgtgtttgtctcggccactccggctgaatatgaacga
actcacgccgatcaggtagtcgagcaggtggtcaggccgaccggcctggtggatccgcgc
atcgaggtgcggccagcgttgacgcaggtggatgatctgatgcaggaaattactgctaga
gtgaagttgcatgagcgggtcttggtgactaccttgaccaagcgcatgtcggagcagctc
acagaatttttaagtgataacggcattaaagtgcgctatctgcatagtgatatcgatacc
gtagagcgggtagaaattttgcgcgatttacgcctcggcaccttcgacgtgctggtcggg
attaatctgttgcgtgagggtttggatattccagaggtctcgttagtggcgatccttgat
gccgataaagaggggtttttacgctccgagcgcagcctgattcaaaccataggccgggct
gcgcgtaatctcaacggaaccgcgattttatatgccgaccggattaccgattccatgcga
cgtgccatcgacgaaaccgagcgaaggcggaataaacagatcgcgtttaatctggaaaac
aatatcacgcctaccggtatcaagaaaaagatcaaggacattattgatggtgtctacaat
ccgcaagaggcgcgcgaagaattagcggtagcgcaagagcaggctaagtacgaaatgatg
agtgagaagcaaatcagtcgcgaaattaagaagttggaaaaactgatgatggatcacgcc
aagaatctggagtttgaaaaggcgggtatggtcagggatcaacttgcgcatctgaagcag
cagttgtttggtgcggatggtaaggataatctggcggcactgagtgcaaggctttaa
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