Ustilaginoidea virens: 66061260
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Entry
66061260 CDS
T11247
Symbol
UV8b_00482
Name
(RefSeq) uncharacterized protein
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
uvi Ustilaginoidea virens
Pathway
uvi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
uvi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
66061260 (UV8b_00482)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
uvi03019
]
66061260 (UV8b_00482)
Messenger RNA biogenesis [BR:
uvi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
66061260 (UV8b_00482)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
66061260 (UV8b_00482)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
DUF3819
CNOT1_TTP_bind
CNOT1_HEAT
ARM_Cnot1
Motif
Other DBs
NCBI-GeneID:
66061260
NCBI-ProteinID:
XP_042993914
UniProt:
A0A8E5HIT5
LinkDB
All DBs
Position
1:join(2522192..2522446,2522585..2522909,2523004..2528945,2529077..2529115)
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AA seq
2186 aa
AA seq
DB search
MVPPQRPGSFSPNPAQTLQTGNNHSPHPSHTGIFSAGASPSTSSPIGTNSLTKIVVAQVY
LLLSTIKEDPSDRSKFDTQAEQLKKLIDENGMEVFSKYFTRLVAGNASHIFPGLNRPGTG
PGNYHILVNEVKRISHDVHQAGKIAESVEGGTEDIFRDFDLSTFMEHFKLDALEKTLLAL
AFKTGSRSDLKTRADAILSTNFTTFVDIISRPDLEAHADLSPAFVASIVDRFLQYHPPSF
NASSLRDLHNSISKRFLTADQAPPSEVLAALDLGRVLADRPANALARYMQRTGSEFSKDE
ETCFSYLQNRPNIAQLNPEQAAHALIYAAISQSTVHDPAILVSALQRVVPKSFDWNDVVL
FFDQPTARLSSAQFLRLYNALLPLANNTKNNFHIQRLWGGSWSEPEAQLSFVSAYASLGP
DQLDATTIPGLQRSIVLEDYADSPINVQDRAAVAVKHPLVSVAALSAIFNVALNSVHASQ
TIEAKRLFQEVVVPNLDIFLVSAFEVPRQSWATMAVDTLNSLFENFLYKRSPEYDFVLDS
LWRKDKDWVTARLIEAHAVKPSDIPLIFEHAVRHGWLDVLVYLPNGFGIDLAAFAHAQGY
LDLNNWANFNKDRSAEISRTLLQFLIIKGELEIRFQRPAEDQLQAKPSTSLQVRTVSALL
SILEDFLPKAPMQDLILVQRLCITAYPRLINFGEGYDDIIEASSKDGNALPIAANAKMED
HYKKMYGDEMQVRTIVDILDQYKHSRDPLDQDTFACMIHGLFDEYSHYGGYPLEALATTA
VLFGGIISHKLISDLPLKIGLGMILEAVRDHTPDDPMYKFGLQALMQLLVRFREWPGFCK
QLLRIPGLEGTEAFKKAEEIVRDHEDELVSASNGTGASHGLAFGAESFANGGTDDRPNND
SQAPAFAAINVEPIPQAAEFEDPGEDDQGKIQFVLNNITQGTIQSMRDELRDMLERKHQH
WFASHLVEERAKMQPNYHHVYLELVTLLQDKSLWNEVLRETYISVARMLNAEATVQNSTE
RTHLKNLGGWLGLLTLARDRPIKHKNIAFKQLLIEAHDTKRLIIVIPFVCKVLTQGASSA
VFRPPNPWLMDIIHLLIELYHHAELKLNLKFEIEVLCKGLNLDHKSIEPSGEILNRPAAE
EVADVLGPEQLEAFDSMSLNGMGSSVGVGMTSQAVAATIPDLGPLINIPPTNEMVVSTTR
LHDIVRNALTRALQDIIQPVVDRSVTIAAISTAQMIRKDFVAEPDENRVRTAAVSMVKAT
AGSLALVTSKEPLRANLTNYMRNFSNDLPSGLPEGTIIMCVNSNLDLACSIIEKQAEERA
VPEIEDMIEPELEARRHHRMQQPNEPFYAGPVNRWAMTIPNPYKLSPNINGLNPEQMAIY
DDFARQPRIAPATTSPHAASTSDATRSLANEVLQEPYSTIPNISTPAETPSMQHLGSQMP
TYAPMHTTAAANVLQSGRNAGFHMDVRGLAERVNKLLQELLRVAGEAREDHFLDLPRPHP
VLDVVDALVQLIIKTSQNSEEFAIYAAEQISALIFQQVEDNLTLESLVHVLETLRKISGH
ALNNRVRTLFSQQPGSNFLSLHLLAALIRTDLLDWRNIDLAMSKALEARKEGSLDFLEHM
LDLALLNNRPIALYADFVRTLEMAWGWISEEPNNSTGQRLKTKLLGSDPPQFSRGGLDVD
AQGGFRRNQMEYVFEEWVHLYNNQNASDKATALFIRQLQVKQVIRDRNDFFVFVRIAIDL
SIDRFEHIVHAGAIGDAYVMIDAVARLICMFINLQEDTSMSRASFLDSALVLITLILHHH
HLKRGENMNQRIFFRLLSGLLHEVLVNSGKVSDEEQHSLVRKFASRFYGLGPRYLPGFIF
GWMSLIQHRVFLPTMLQMPGNAGWTLYANLLVQLLDCLAEQLKALNVLTVSKEVYRATLK
LLIILQHDFPDFMGGKQLSLCSSMPPHCTQLLNSVLVANPQQGYTKSADGKEDMKIYPGL
IEEARVMLQDCGLLSLVEQTLQSGPSEDAVAQIAHAMTQSESKETAYGHATVAANPRIIG
AIVIYMGNHAAERLSRSMPSISVTGSEPEVSTLSLLVHELSPETRYYLIVSIINQLRFPS
RLTEFCSQFLLSVFGKDLSDPEDTDIRQEITRVLLERLVGYWPQPWGLMLTVLELVKNDK
YKFFELPFIKSTPEVVERFAALLPRT
NT seq
6561 nt
NT seq
+upstream
nt +downstream
nt
atggtccctccacaaagaccgggatcattctcaccaaacccggcccagacgcttcagact
ggaaacaatcactcccctcatccatcgcacactggtatttttagtgctggcgcaagcccc
agcaccagcagtccgatagggactaactcccttacaaagattgttgtcgctcaagtctat
cttctactgagtaccatcaaagaggatccctcggatagaagcaaatttgacacgcaggca
gagcagctaaaaaagcttatcgatgaaaacggaatggaagttttttccaaatatttcacc
cggttggtcgccggaaatgcatctcatatatttccgggcttgaacagaccaggaacaggt
cccgggaactaccatatcctcgttaacgaggtgaaaaggatttcccacgatgtgcatcaa
gctggtaaaatagccgaatcggtagagggcgggacggaagacatattccgcgatttcgat
ctgtcaacatttatggaacatttcaagctcgatgctctggaaaaaacactcttagccctg
gctttcaaaactgggtcgcgttcggatttgaaaacgagagccgatgcaattttgtctaca
aacttcacaacttttgtggacattatttcacgacccgatcttgaggcgcatgccgatcta
tctcccgcctttgtagcctccatcgttgatcggtttttgcaatatcatcctcctagcttc
aatgcctcgtctcttcgcgatcttcacaactctatcagcaagcgattccttaccgccgat
caggctccgccctccgaggttctagctgctttagatttgggcagggtactggctgatagg
cctgcaaacgctctggcaaggtatatgcagcgaaccggttcagaattcagcaaagatgag
gagacatgcttttcgtacctacaaaaccggccaaatattgcgcagttgaacccagagcag
gcagctcatgcccttatctatgctgctatcagtcagtctacagtgcacgaccctgctatc
ctcgtttccgccctgcaacgagtcgtccccaaatcatttgattggaatgatgtggttctg
ttcttcgatcaacccacggctcgcctctcctccgctcagttcttgcgactctacaacgcc
ctcctgccgttagcgaacaacacgaagaataattttcatattcagaggctttggggtggc
tcgtggagtgaaccagaagcacagctttcgtttgtcagtgcatacgcctccctgggtcct
gatcagctagatgccacaactattcccggcttgcagcggagtattgtcctcgaggattat
gccgattctcccatcaacgtacaggatagagctgctgtggccgtgaagcatccactggtg
tctgtggccgctctttccgcaatattcaatgttgcgctgaactctgtgcatgcgtcgcaa
acgatcgaggcgaagcgacttttccaagaagtggtagtgcctaatctagacattttccta
gtttctgcctttgaggttccgagacaatcatgggcaacgatggcggtcgacaccttaaat
tcgctattcgaaaactttttgtacaagcggtcaccagaatatgactttgttctggatagc
ttgtggaggaaggacaaagattgggtcactgccagactgatcgaggctcatgccgtcaag
ccatcagatatccctcttatattcgagcatgcggtacggcacggctggttagatgttctg
gtctatttacccaacggctttggtatcgatttagctgcctttgctcatgcacagggttat
ctagacctaaacaactgggcaaatttcaacaaggataggagtgcagagatttctaggacc
ctcttgcagttcctgataatcaagggcgagctggagatcaggtttcaacgaccagctgaa
gaccaattgcaagccaagccaagcaccagcctgcaggtccgcacagtatccgctctcctg
tcaattctcgaggatttcctaccgaaagctcccatgcaagatctcatacttgttcaacgt
ctttgcatcacagcttatcccaggctgatcaattttggagaaggttacgatgatattatt
gaagccagcagcaaagacggaaatgctcttcccattgcagcaaatgccaagatggaagat
cattacaagaagatgtatggtgacgagatgcaggtgcgaactattgtggatattttggac
caatacaagcactccagggatcccctggaccaagacacgttcgcttgtatgatccacggg
ttgttcgacgaatacagccattacgggggctatcccttggaggccttggctaccacagct
gttttgttcggcggcatcatctcacataagcttatttcggatctcccattgaagattgga
ctcggcatgatcctcgaagccgttcgtgatcacactccagacgaccctatgtacaagttc
ggtcttcaagccctaatgcagctcctggtccggtttcgggaatggccaggtttctgcaag
cagctactccgaattcccggcctcgagggaacagaggctttcaaaaaggctgaagagatt
gttcgcgaccatgaagacgaacttgttagcgctagtaatgggacaggtgcatctcatggc
ctcgcatttggggctgagtcctttgcaaatggcggtacagacgatcggccaaataatgat
tcacaggctcccgcttttgcagcaatcaacgttgagcccattccccaagctgccgagttt
gaggaccctggtgaagacgaccagggcaaaattcagttcgtcctaaacaacattactcag
ggcaccattcaatccatgcgggacgaattgcgagacatgcttgaacgcaagcaccaacac
tggtttgcaagtcacctggtggaagaacgcgccaagatgcagccaaactaccatcatgtg
tatcttgagctggtcacactcttgcaggacaagagtttatggaatgaagtgctccgcgaa
acttacattagcgtagctcgcatgttgaacgcggaagctaccgtgcagaattccacggag
cgaacccatctgaagaacttgggcggctggctcgggttactcacgcttgctagggatcgt
cctatcaagcataagaacattgctttcaagcagcttcttatcgaagcacacgatacgaag
aggctgatcattgtcattccatttgtttgcaaagtgctgacccaaggcgcttcatctgca
gtcttccggccaccaaatccttggctaatggacattattcacttgttgattgagctgtat
catcatgcagagttgaagctcaacctcaagtttgagattgaggttctttgcaagggcctc
aaccttgatcataagagcattgagccatctggtgaaatccttaatcgtcccgcagcagaa
gaggtcgcagatgttcttggtccggagcaattggaagcattcgacagcatgtctttgaac
ggaatgggatcttccgtcggtgtgggtatgacctctcaagccgttgccgccaccatccca
gatctcggtcctttgatcaacattccacctacaaacgagatggttgttagcaccacacgt
ctccacgacatcgtcagaaacgctcttacgcgggctttgcaggatatcattcaaccagta
gtggacagatctgtgactattgccgcaatctcaaccgcccagatgattcgaaaagatttt
gttgccgaacctgatgagaatcgtgtgcgcaccgctgcggtcagcatggtgaaagcaact
gccggcagtttagctctggtgacctcgaaagaaccgcttcgggccaatttgactaactat
atgcgaaatttctcaaacgacttgccctcgggtctccctgaaggaacaatcatcatgtgc
gtcaactcgaatcttgatcttgcttgtagcatcatcgagaagcaggccgaagagagggcg
gtaccggagattgaggacatgattgagccagaactcgaggccaggagacatcatcgcatg
cagcaaccaaacgagccgttttacgctggacctgtcaaccgatgggccatgacaattcca
aatccatacaagctctcgccaaatatcaacggcctgaatcccgaacagatggccatttat
gatgacttcgcccggcagcctcgaatcgcgcccgccaccacctcacctcacgcagcgtca
acgtctgatgctacacgctccctggcgaacgaagtccttcaagaaccgtacagtaccatt
ccaaacatttcaaccccagcagaaaccccgtcaatgcagcacttgggctcccagatgcca
acttatgcacccatgcatactactgctgcagcaaatgttcttcaaagtgggcgtaatgca
ggatttcatatggatgttcgtggcttagccgagcgcgtcaataaactgctccaggaactg
ttgcgtgtcgcaggtgaagctcgggaagaccactttttggacctacccaggccgcatcct
gtactcgacgtagtggacgcccttgttcagctcatcatcaagacttcgcagaactcagaa
gagtttgccatttacgcggctgagcagatcagcgctcttatttttcagcaagtcgaagac
aatctaaccttggagagcctggtgcacgtgctggagaccttgagaaagatttctgggcat
gccttgaacaaccgtgtgcgaactctcttcagccaacagccaggctcaaacttcctgagt
ctccaccttctggctgctctcattcgaacggatttgctcgattggagaaacattgatctg
gcgatgtcgaaggcactagaggctcgcaaggaaggctcgctggactttcttgaacacatg
ctcgaccttgcgctcctgaacaaccgcccgattgcgttgtatgcagactttgttcgaact
cttgagatggcttggggatggatatctgaggagccaaacaattcgaccggacaaagattg
aaaacgaagctcctaggctcagatccgcctcagttttcccgaggagggttggatgtggat
gctcaagggggctttcggcgaaatcagatggagtacgtctttgaggaatgggtccatcta
tacaataaccagaatgcatcggacaaagccacggctctcttcatccggcaactgcaggtg
aagcaggtcatacgcgacagaaatgacttttttgtctttgtacgaatcgccattgacctg
tccattgatcgattcgaacacatcgttcacgccggtgctattggcgatgcatacgtcatg
attgacgccgtggccaggctaatctgcatgtttatcaacctgcaggaggatacgtcaatg
tctcgtgcttcgttcctcgactcggccttggttctcatcacgctcattttgcatcatcat
cacctgaagaggggggagaacatgaatcagagaatcttcttccgcctgctctcggggctt
ctgcacgaagttctcgtcaactcgggcaaggtctcggatgaggaacagcacagcctggtg
cgcaagtttgcctcgaggttctatggtcttggcccccgctacctgccagggtttatcttt
gggtggatgtcactcattcaacaccgggtgttcttgccgaccatgttacagatgccaggt
aacgccggttggactctgtatgccaacctgttggttcaattgctggactgcctggccgag
cagctgaaggccttgaatgtcttgacagtgtccaaggaggtttaccgggccactctgaag
ctgctgatcatcctgcaacacgactttccggatttcatgggcggcaagcaactgagtctt
tgctcaagcatgccgcctcactgcacgcagctgctcaactcggtgctggttgccaatcct
caacagggatacaccaagtcggccgacggcaaggaggacatgaagatctatcccggactg
attgaggaggctagggtgatgctgcaagattgcggactgttgagcctggtagagcagacg
ctccagagcggaccgtcggaggatgccgtcgctcaaatagcacacgcaatgacacagtcc
gagtcaaaggagacggcttacggacacgcgactgttgcagccaatcctcgcattatcggc
gccatcgtcatctacatgggcaaccacgcagccgagcgactgtctcggtccatgccgtcg
atcagtgttacgggcagtgagccggaggtgtcgaccttgtcccttcttgtgcacgagctg
tcaccggagacacgttattacttgattgtcagcatcataaaccaattgcggttcccgagc
aggcttaccgagttttgcagccagtttctcctctctgtcttcggaaaggacctgagtgat
cccgaggacactgatattcgccaggaaatcactcgagtgttgctggaacgtttagtcgga
tactggccgcagccctggggtctcatgttgacggttctcgaacttgtaaagaatgacaag
tacaagttctttgagctcccttttatcaagtcgactccggaggtcgtcgaacggtttgct
gccctgcttccacggacatga
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integrated database retrieval system
