KEGG   Variovorax sp. PAMC 28711: AX767_06720
Entry
AX767_06720       CDS       T04325                                 
Name
(GenBank) signal recognition particle
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
vaa  Variovorax sp. PAMC 28711
Pathway
vaa02024  Quorum sensing
vaa03060  Protein export
vaa03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:vaa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    AX767_06720
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    AX767_06720
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    AX767_06720
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vaa02044]
    AX767_06720
Enzymes [BR:vaa01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     AX767_06720
Secretion system [BR:vaa02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   AX767_06720
  Eukaryotic Sec-SRP protein
   AX767_06720
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N Zeta_toxin CbiA APS_kinase AAA_22 cobW nSTAND3 AAA_33 AAA_16 AAA_31 AAA_17 AAA_24 AAA_19 AAA_18 AAA_28 AAA_14 Thymidylate_kin T2SSE AAA_30 ResIII DO-GTPase1 TsaE YqeC ArsA_ATPase KTI12
Other DBs
NCBI-ProteinID: AMM24071
LinkDB
Position
complement(1339329..1340717)
AA seq 462 aa
MATALTEKFSRLVKQMSGQARITEANVQDMLREVRMALLEADVALPVVRDFIARVKDKAL
GQEVLGSLKPGQALVGIVSRELTATIGDGISDINLVAQPPAVILMAGLQGAGKTTTTAKL
AKHLIEKRKKKVLTVSGDVYRPAAIEQLKTVTKQAGAEWFPSTPDQKPLDIARAALDHAK
RHFFDVLLVDTAGRLAIDEVLMTEIKELHSALNPVETLFVVDAMQGQDAINTAKAFKDAL
PLTGIILTKTDGDSRGGAALSVRQITGVPIKFAGTSEKIDGLEVFDAERHAGRILGMGDI
VALVEQVTAGVDVASAQKLAAKLKSGSGFDLNDFLGQIQQMKQMGGLSSIMDKLPQQMAA
KTTEADMTRAERDIRRKEGIIQSMTPQERRKPELLKATRKRRIAAGAGVQVQEVNRLLNE
FDQMQTMMKKMKGGGLMKMMKKMGGMKGMPGMGGPGGPKLPF
NT seq 1389 nt   +upstreamnt  +downstreamnt
atggccaccgccctcaccgaaaaattctcccgtctcgtcaagcagatgagcggccaagcg
cgcatcaccgaagccaacgtgcaggacatgctgcgcgaagtgcgcatggcactgctcgag
gccgacgtggccctgcccgtcgtgcgcgatttcattgcccgcgtcaaggacaaggcgctc
ggccaggaagtgctcggctcgctcaagccgggccaggcgctcgtcggcatcgtcagtcgc
gaactgaccgccaccatcggcgacggcatttccgacatcaacctcgtggcgcagccgccc
gccgtgatcctgatggccggcctgcaaggcgccggcaagaccacgaccacggcgaagctg
gccaagcacctgatcgagaagcgcaagaagaaggtgctcaccgtgtctggcgacgtgtat
cgcccggccgccattgaacagctcaagaccgtgaccaaacaggccggcgccgagtggttc
ccgagcacgcccgaccagaagccgctcgacatcgctcgcgccgcgctcgaccacgccaag
cgtcatttcttcgacgtgctgctggtcgacaccgctggccgcctcgcgatcgacgaagtg
ctgatgaccgaaatcaaggaactgcacagcgcgctgaacccggtcgaaacgctgttcgtg
gtcgacgcgatgcagggccaggacgcgatcaacaccgccaaggccttcaaggacgcgctg
ccgctcaccggcatcatcctgaccaagaccgacggcgattcgcgcggcggcgcggcgctg
tcggtgcggcagatcacgggcgtgccgatcaagttcgccggcaccagcgagaagatcgac
ggactcgaggtgttcgatgccgaacgccacgccggccgcatcctcggcatgggcgacatc
gtcgcgctggtcgaacaggtgacggcgggcgtcgacgtggcgtcggcgcagaagctggcg
gccaagctcaagagcggctcgggcttcgacctgaacgactttctgggccagatccagcag
atgaagcaaatgggcgggctctccagcatcatggacaagcttccgcagcagatggccgcc
aagaccaccgaagccgacatgacccgcgccgagcgcgacatccgtcgcaaggaagggatc
atccagagcatgacgccgcaggagcgccgcaagccagaactgctcaaggccacgcgcaag
cgccgcatcgctgccggagccggtgttcaggtccaggaagtgaaccgcctgctcaacgag
ttcgatcagatgcagaccatgatgaagaagatgaagggcggcggcctcatgaagatgatg
aagaagatgggcggcatgaaaggcatgccgggcatgggtggaccgggcgggccgaagttg
ccgttctga

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