Vagococcus xieshaowenii: E4Z98_02225
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Entry
E4Z98_02225 CDS
T05932
Symbol
uvrC
Name
(GenBank) excinuclease ABC subunit UvrC
KO
K03703
excinuclease ABC subunit C
Organism
vac
Vagococcus xieshaowenii
Pathway
vac03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
vac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
E4Z98_02225 (uvrC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vac03400
]
E4Z98_02225 (uvrC)
DNA repair and recombination proteins [BR:
vac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
E4Z98_02225 (uvrC)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
GIY-YIG
UVR
HHH_5
HHH_2
GIY_YIG_2
5_3_exonuc
MLD
GIY_YIG_domain
Motif
Other DBs
NCBI-ProteinID:
QCA28186
UniProt:
A0A4Z0DCA2
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Position
460069..461856
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AA seq
595 aa
AA seq
DB search
MNETINHKLSLLPTNPGCYLMKDKHGTIIYVGKAKNLRNRVKSYFRGSHDTKTERLVSEI
VDFEYIVTESNTEALVLEINLIQENQPKYNIMLKDDKYYPFIKITNERYPRLLITRKVKK
DKALYFGPYPDVHSANETKKILDKLYPLRKCQKLPKEVCLYYHLGQCLAPCVYDINPKVY
EGMIQDIKHFLKGDGYKEVIRQLESFMQDAAESMAFERAAELRDQIAAIKGVMEKQKMTL
TDFVDRDIFGYHVDKGWMCVQVFFIRQGKMIQRDVSIFPFYNEAEEDFLTYLGQFYLENQ
HFKPKEIFIPDTIDQESAQVLLQTKVIQPKKGEKKQLVELANKNARVSLEQKFELIERKT
ERTMGAVEGLGEALNIPVPIRIEAFDNSNIMGTSPVSAMVVFLNGQPAKNEYRKYKIKTV
EGPDDYATMKEVIYRRYSKVLRDNLPFPDLVIIDGGKGQIEAARDVLENQLGLDIPIAGL
AKNEQHKTSELLYGQPLEIVPLKRQSNEFFLLQRIQDEVHRFAITFHRQVRSKNSFASKL
DGIEGLGPKRKQLLLKHYKSVKNIMQATAEEINEVGVPLKVAQEVVKQLHEKLNS
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaaacgatcaatcataaattatcgttactgccaactaatccaggctgttatttg
atgaaagataagcatggaacgattatttatgtaggaaaagctaaaaatttaagaaatcgg
gtaaagtcatatttcagaggaagccatgatacaaagaccgagcgcttagtgagtgaaatt
gtcgattttgaatacatcgtgacggaatccaatacggaagctttagtattggaaattaat
ttaattcaagagaatcaaccaaaatataacatcatgttaaaagatgataagtactatccg
tttattaagattactaatgagcgttacccacgcttattaatcacaagaaaagttaaaaaa
gataaagctctttattttggtccatatccagacgttcattcggctaatgaaacaaaaaaa
attctagataaattatatccattaagaaaatgtcagaaactgccgaaagaagtgtgttta
tattatcatctagggcaatgtttagcaccatgtgtatatgatattaatcccaaggtatac
gaagggatgattcaagatattaaacattttttaaaaggagatggttacaaggaggtcatc
cgtcagctagaatcttttatgcaagatgctgctgaaagcatggcctttgaacgtgcggct
gaattgcgagatcaaatagccgcaatcaaaggagtaatggagaaacaaaaaatgacctta
acagattttgtggaccgtgacatttttggctaccatgtggataaaggctggatgtgtgtt
caagtattctttatccgtcaagggaaaatgattcaacgagatgtgtcgatttttccattt
tataatgaagctgaggaagattttttaacttatttgggtcagttttacttagaaaaccag
cactttaagccaaaagaaatctttattccagatacaattgaccaagaaagtgcacaagta
ttattacaaacgaaggtgatacaacctaaaaaaggtgaaaagaaacagttagtggagttg
gcaaataaaaatgctcgcgtttctttagaacagaagtttgaattaattgagcgtaaaacg
gagcgtacgatgggcgctgtcgaaggattaggcgaagcattaaatattccagttcctatt
cgcatcgaagcctttgataactctaacattatgggaacaagtccagtatcggctatggta
gtgtttttaaatggtcaacctgcaaaaaatgaataccgaaaatataaaataaaaacagta
gaaggaccagacgattacgctacgatgaaagaagtgatttaccgtcgctattcaaaagtc
ttacgagataatttgccgtttcctgatttggttattattgatggagggaaaggacaaatt
gaagcagcacgagatgtactggaaaatcaattagggttagatattcctattgcggggtta
gccaaaaatgagcaacataaaacgagtgaattattatatgggcaaccattggaaattgtt
cctttaaagcgtcaatctaatgagtttttcttactacagcgaatacaagatgaggtccat
cgctttgccatcactttccatcgacaagttagaagtaaaaatagttttgcttctaagttg
gatgggatagaaggcttaggcccaaaacgcaaacaattattattaaagcattataagtcg
gttaaaaatatcatgcaggcaactgctgaagaaataaatgaagtgggcgtaccgctaaaa
gtggctcaagaagtagttaaacaattacatgaaaagctgaatagttag
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