Variovorax sp. EBFNA2: RZE79_03035
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Entry
RZE79_03035 CDS
T10564
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
vae Variovorax sp. EBFNA2
Pathway
vae03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RZE79_03035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vae03400
]
RZE79_03035
Enzymes [BR:
vae01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
RZE79_03035
DNA repair and recombination proteins [BR:
vae03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RZE79_03035
Prokaryotic type
RZE79_03035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
WPG38325
LinkDB
All DBs
Position
683135..683857
Genome browser
AA seq
240 aa
AA seq
DB search
MTRPDQLSSSDPADWPVATGWQPLVDDFFAGAVGQKLQGFLRERLDAGAVIFPPQPLRAL
ELTPPEDVRVVILGQDPYHGRGQAEGLAFSVASGVALPPSLRNIFKELQRDLGTPPPAFP
DPGGSLVKWATHGVLLLNTCLTVEEAQPASHAGRGWEVLTDAVIRHVAQGDRPVVFMLWG
SHAQSKRALIDVGRHKVLMSNHPSPLSALRPPVPFIGCGHFGQARAWREAQQPGGSELRS
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgacccggccggatcagctgtcgagcagcgatcctgccgactggccggtggcgacgggc
tggcagccgctggtcgacgatttctttgcgggcgcagtcggccagaagctgcagggtttt
ctgcgcgagcggctcgacgccggggcggtgatctttccgccgcagccgttgcgggcgctg
gaactcacgccgccggaagacgtgcgggtcgtgatcctgggccaggacccgtaccacggg
cgcggacaagccgaggggctggccttctcggtggcatcgggcgtggccctgccaccgtcg
ctgcgcaacatcttcaaggagctccagcgcgacctgggcacgccgccgccggcgtttccg
gacccgggcggcagtctcgtgaagtgggcgacgcacggcgtgctgctgctcaacacctgt
ctcaccgtcgaagaagcccagccggccagccatgcaggccgcggctgggaggtgctcacc
gacgccgtgattcgccatgtggcgcagggcgatcgacctgttgtttttatgctatggggc
tcgcacgcgcaaagtaagcgcgcgttgattgacgttgggcgccataaggtgctgatgtcg
aatcatccctcgccgctttctgcgcttcggccgccggttccattcatcggctgcggtcat
tttggccaagcccgtgcatggcgcgaggcgcagcagccgggaggctccgaacttcgctca
taa
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integrated database retrieval system
