Vagococcus coleopterorum: G7081_01175
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Entry
G7081_01175 CDS
T06513
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
vah
Vagococcus coleopterorum
Pathway
vah03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vah00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
G7081_01175 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vah03019
]
G7081_01175 (pnp)
03016 Transfer RNA biogenesis [BR:
vah03016
]
G7081_01175 (pnp)
Enzymes [BR:
vah01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
G7081_01175 (pnp)
Messenger RNA biogenesis [BR:
vah03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
G7081_01175 (pnp)
Transfer RNA biogenesis [BR:
vah03016
]
Prokaryotic type
tRNA degradation factors
G7081_01175 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
S1_2
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
QIL45796
UniProt:
A0A6G8ALB8
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All DBs
Position
complement(243665..245803)
Genome browser
AA seq
712 aa
AA seq
DB search
MSEKKVFSMDWGGRPLSVEVGQLAKQANGSVFVRYGDTVVLTAAVGSKEPKDVDFFPLTV
NYEEKMYAAGKVPGGFIKREGRPSEHATLTARLIDRPIRPMFAEGFRNDVQITNVVMSVE
QDCTPEMSAMLGSSLALCISDIPFNGPIAGVNVGRVNGEYILNPTVEQQELSDIDLSVAG
TKDAINMVESGAKEVSEEDMLGALLFGHAAIKELVAFQEKVVAEVGKEKMEIKLLQVDPA
LETEINDAFKVRMVEAIQTEEKLAREDNISAIKKEIIEMYEEKFADEDDAAKRMKEVRQT
AEDMEKNEVRRLITIDKVRPDGRKIDEIRPLASEVGLLPRVHGSGLFTRGQTQALSTVTL
APLGEHQIIDGLGTEETKRFIHHYNFPQFSVGSTGPTRAPGRREIGHGALGERAMMQVIP
SAEEFPYMIRVVSEVLESNGSSSQASICGGILALMDAGVPIKAPVAGIAMGLVMDGNDYT
VLTDIQGLEDHLGDMDFKVAGTEAGITALQMDIKIEGITEQILTEALAQAKKARMEILNV
ITDAIAEPRAELSQYAPKIEMIQIDPNKIKAVIGKGGDTINGIIDETGVKIDIDQDGKVS
IASEDAAMIKRAIEIIEELTKEAKVGEVYEAKVVRVEKFGAFVNLFKGKDALVHISQLAH
ERVANTEDVVKEGDVIKVKITEIDKQGRVNASRKELMPKPEPKVEAKPEESK
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaaaaaaagtattttcaatggattggggcggacgtccgctttcagtagaggtt
ggccaattagcgaagcaagctaatggatcagtattcgttcgttacggggacactgtggta
ttaaccgcagcggtaggatctaaagaacctaaggatgttgatttctttccgttaacagtt
aactatgaagaaaaaatgtatgcagcaggtaaagtgcctggtggcttcattaaacgtgaa
ggacgtccgagcgaacatgctacattaacggctcgtttaatcgaccgtccaatccgtccg
atgtttgcggaaggtttccgtaatgacgtacaaattaccaacgtggttatgagtgtggaa
caagactgtacaccagagatgtctgcgatgttagggtcatcgttagctttatgtatttca
gatattccgtttaacggtccaattgcaggtgttaatgtggggcgtgtaaatggcgaatac
attttaaacccaaccgttgaacaacaagaattatcagatatcgatttaagtgttgccgga
acgaaagatgctatcaacatggttgagagtggtgcgaaagaagtatctgaagaagatatg
cttggtgcattattattcggacacgcagctattaaagaattagttgctttccaagaaaaa
gttgttgctgaagtcggcaaagaaaaaatggaaatcaaattattacaagttgatccagct
ttagaaacagaaattaacgatgctttcaaagttcgtatggttgaagcgattcaaacagaa
gaaaaattagctcgtgaagataatatttcagcaatcaaaaaagaaatcattgaaatgtat
gaagaaaaatttgctgacgaagatgatgcagctaaacgcatgaaagaagttcgtcaaact
gctgaagatatggaaaaaaatgaagttcgtcgtttgattacaattgataaagttcgtcct
gatggtcgtaaaattgatgagattcgtcctttagcaagtgaagttggtttattaccacgc
gttcacggttcaggactattcactcgtggacaaacccaagcgttatctacagttacttta
gcgccattaggtgaacatcaaattattgatggtctaggtacggaagaaacaaaacgtttc
attcatcactataacttcccgcaattctctgtagggtcaactggtccaacacgtgcacca
ggtcgtcgtgaaatcggtcacggtgctttaggtgaacgtgcgatgatgcaagttattcca
tctgctgaagaattcccgtacatgattcgtgtggtttctgaagtattagaatcaaacggt
tcatcatcacaagcaagtatttgtggtggtatcttagcgcttatggatgctggtgtgcca
attaaagccccagttgctggtatcgctatgggattagttatggacgggaatgattatact
gtcttaacggatatccaaggtttagaagatcacttaggtgatatggactttaaagttgcc
ggaactgaagccggaattactgctttacaaatggatattaagattgaaggtattactgaa
caaattcttactgaagccttagcgcaagctaaaaaagcgcgtatggaaattctaaatgtt
attacagatgctattgctgaaccacgtgctgagttaagccaatatgcacctaagattgaa
atgattcaaattgaccctaataaaatcaaagcagttatcggtaaaggtggcgacacaatt
aacggtatcattgatgaaacaggtgttaagattgatattgatcaagatggtaaagttagc
atagcttctgaagatgctgcaatgattaaacgtgcgatcgaaatcatcgaagaattaaca
aaagaagctaaagtcggtgaagtttacgaagctaaggtagttcgcgttgaaaaatttgga
gctttcgttaacttgttcaaagggaaagatgctttagttcacatttctcaattagcccat
gaacgtgttgctaacactgaagatgttgttaaagaaggtgacgtgattaaagttaagatc
actgaaatcgataaacaaggtcgtgttaacgcatctcgcaaagagttaatgccgaaacca
gaaccaaaagttgaagcaaaaccagaagaaagtaaatag
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