Vagococcus coleopterorum: G7081_03735
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Entry
G7081_03735 CDS
T06513
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
3.6.4.13
]
Organism
vah
Vagococcus coleopterorum
Pathway
vah03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vah00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
G7081_03735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vah03019
]
G7081_03735
03009 Ribosome biogenesis [BR:
vah03009
]
G7081_03735
Enzymes [BR:
vah01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.4 Acting on acid anhydrides to facilitate cellular and subcellular movement
3.6.4.13 RNA helicase
G7081_03735
Messenger RNA biogenesis [BR:
vah03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
G7081_03735
Ribosome biogenesis [BR:
vah03009
]
Prokaryotic type
rRNA helicases
G7081_03735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
DHFR_1
AAA_19
Motif
Other DBs
NCBI-ProteinID:
QIL46241
UniProt:
A0A6G8AMD6
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All DBs
Position
743330..744802
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AA seq
490 aa
AA seq
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MSSFEKLGINQSIIKALNLMGYEQPTKVQSEVIPVFKEGQDILVKSQTGSGKTAAFGIPL
VDMVEWEERAPQGLVLAPTRELALQIQAEIFNLGRFKRMKVEAVFGRSSFEQQEKMLKQR
THIVVATPGRLLDHVKRGTIDLSKIKYLVIDEADEMLDMGFVEQIEAVIKALPNKHQTAL
FSATMPDRIKELVDRYLTVPKMIEVSSANQVQKRIEQVYYNVLEDDKLQLLLDVIVVENP
DTSIIFCNTRDAVEEVVDALEQLGAKPEMLHGGMEQRDRTKTINEFKQGYFRYLVATDVA
ARGLDVTDVTLVVNFDLPDKVENYTHRIGRTARFENSGRALVFVNQFDERRFSAIRESYS
DIQQFMAPKEELVISQMSSFSAKQNRQPELKALKELVFKDEIMKLHINAGKKTKMRAGDV
VGAICNIDGLSGDDIGVISLLDVSTFVEILNGKGDKVLKELQSMPIKGRMRRVNKANESQ
YEKEMTNRNK
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcatttgaaaagttaggaatcaatcagtcaatcatcaaggctttaaacttgatg
ggatatgaacagccaacaaaggttcaatctgaagtgattccggtatttaaagaaggtcaa
gatattttagttaaatctcagacgggaagtggtaagacagcggcgtttgggataccttta
gtcgatatggtcgagtgggaagaacgtgcaccgcaagggttagttttagcaccaacacgt
gaacttgctttgcaaattcaagctgaaattttcaatcttggtcgttttaagagaatgaag
gttgaggcagtttttggtagaagttcatttgaacaacaagagaaaatgttgaaacaacga
acgcatattgtggttgcaacaccaggtcgtttattagatcatgttaaacgtgggacaata
gacctctctaaaattaaatatctagtgatagatgaagccgatgaaatgctcgatatggga
tttgttgaacaaattgaagctgtgattaaggcgctacctaataagcatcaaacagcttta
ttttcggctacaatgcccgatagaattaaggaattagttgatagatatttgactgttcca
aaaatgattgaagttagctctgctaaccaagtgcaaaaaagaattgagcaagtctactat
aatgtgttggaagatgataagctccaattattattggatgtaatagtggttgaaaatcct
gatacatctattattttttgtaacactcgcgatgcagttgaagaggttgtggatgcatta
gagcaattaggtgccaaacctgaaatgttacatggtggcatggagcagcgagatcggaca
aaaacgattaatgaatttaaacaaggatatttccgttatttagtggcaactgatgttgct
gctcgtggcttagatgtgactgatgttactttagttgttaattttgatttacctgataag
gtagaaaattatactcatagaattgggcgtacagcacgatttgagaattcaggtagagcg
ttagtatttgtgaatcaatttgacgaaaggcgcttttcggcaattagagaaagttattcc
gatattcaacagtttatggctcctaaagaagagctagttatttctcaaatgtcatcattt
tcagctaaacaaaatcgtcaaccagaattaaaagcattaaaggaattagtttttaaagat
gagatcatgaagcttcacatcaatgctggtaagaagactaagatgcgtgcaggcgatgtc
gttggagctatctgtaatattgatggtctatctggagatgatattggtgtgattagtctg
ttagatgtttcgacgtttgttgaaattttaaatggtaagggtgataaggttcttaaggaa
ttacagtccatgccgattaaaggtcgaatgcgtcgtgttaacaaagcaaatgaaagtcaa
tatgagaaggaaatgactaatagaaataaataa
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