KEGG   Vagococcus coleopterorum: G7081_03735
Entry
G7081_03735       CDS       T06513                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:3.6.4.13]
Organism
vah  Vagococcus coleopterorum
Pathway
vah03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:vah00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    G7081_03735
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vah03019]
    G7081_03735
   03009 Ribosome biogenesis [BR:vah03009]
    G7081_03735
Enzymes [BR:vah01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.4  Acting on acid anhydrides to facilitate cellular and subcellular movement
    3.6.4.13  RNA helicase
     G7081_03735
Messenger RNA biogenesis [BR:vah03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     G7081_03735
Ribosome biogenesis [BR:vah03009]
 Prokaryotic type
  rRNA helicases
   G7081_03735
SSDB
Motif
Pfam: DEAD Helicase_C DbpA ResIII CMS1 DHFR_1 AAA_19
Other DBs
NCBI-ProteinID: QIL46241
UniProt: A0A6G8AMD6
LinkDB
Position
743330..744802
AA seq 490 aa
MSSFEKLGINQSIIKALNLMGYEQPTKVQSEVIPVFKEGQDILVKSQTGSGKTAAFGIPL
VDMVEWEERAPQGLVLAPTRELALQIQAEIFNLGRFKRMKVEAVFGRSSFEQQEKMLKQR
THIVVATPGRLLDHVKRGTIDLSKIKYLVIDEADEMLDMGFVEQIEAVIKALPNKHQTAL
FSATMPDRIKELVDRYLTVPKMIEVSSANQVQKRIEQVYYNVLEDDKLQLLLDVIVVENP
DTSIIFCNTRDAVEEVVDALEQLGAKPEMLHGGMEQRDRTKTINEFKQGYFRYLVATDVA
ARGLDVTDVTLVVNFDLPDKVENYTHRIGRTARFENSGRALVFVNQFDERRFSAIRESYS
DIQQFMAPKEELVISQMSSFSAKQNRQPELKALKELVFKDEIMKLHINAGKKTKMRAGDV
VGAICNIDGLSGDDIGVISLLDVSTFVEILNGKGDKVLKELQSMPIKGRMRRVNKANESQ
YEKEMTNRNK
NT seq 1473 nt   +upstreamnt  +downstreamnt
atgtcatcatttgaaaagttaggaatcaatcagtcaatcatcaaggctttaaacttgatg
ggatatgaacagccaacaaaggttcaatctgaagtgattccggtatttaaagaaggtcaa
gatattttagttaaatctcagacgggaagtggtaagacagcggcgtttgggataccttta
gtcgatatggtcgagtgggaagaacgtgcaccgcaagggttagttttagcaccaacacgt
gaacttgctttgcaaattcaagctgaaattttcaatcttggtcgttttaagagaatgaag
gttgaggcagtttttggtagaagttcatttgaacaacaagagaaaatgttgaaacaacga
acgcatattgtggttgcaacaccaggtcgtttattagatcatgttaaacgtgggacaata
gacctctctaaaattaaatatctagtgatagatgaagccgatgaaatgctcgatatggga
tttgttgaacaaattgaagctgtgattaaggcgctacctaataagcatcaaacagcttta
ttttcggctacaatgcccgatagaattaaggaattagttgatagatatttgactgttcca
aaaatgattgaagttagctctgctaaccaagtgcaaaaaagaattgagcaagtctactat
aatgtgttggaagatgataagctccaattattattggatgtaatagtggttgaaaatcct
gatacatctattattttttgtaacactcgcgatgcagttgaagaggttgtggatgcatta
gagcaattaggtgccaaacctgaaatgttacatggtggcatggagcagcgagatcggaca
aaaacgattaatgaatttaaacaaggatatttccgttatttagtggcaactgatgttgct
gctcgtggcttagatgtgactgatgttactttagttgttaattttgatttacctgataag
gtagaaaattatactcatagaattgggcgtacagcacgatttgagaattcaggtagagcg
ttagtatttgtgaatcaatttgacgaaaggcgcttttcggcaattagagaaagttattcc
gatattcaacagtttatggctcctaaagaagagctagttatttctcaaatgtcatcattt
tcagctaaacaaaatcgtcaaccagaattaaaagcattaaaggaattagtttttaaagat
gagatcatgaagcttcacatcaatgctggtaagaagactaagatgcgtgcaggcgatgtc
gttggagctatctgtaatattgatggtctatctggagatgatattggtgtgattagtctg
ttagatgtttcgacgtttgttgaaattttaaatggtaagggtgataaggttcttaaggaa
ttacagtccatgccgattaaaggtcgaatgcgtcgtgttaacaaagcaaatgaaagtcaa
tatgagaaggaaatgactaatagaaataaataa

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