KEGG   Verticillium alfalfae: VDBG_01545
Entry
VDBG_01545        CDS       T02227                                 
Name
(RefSeq) hypothetical protein
  KO
K03872  elongin-C
Organism
val  Verticillium alfalfae
Pathway
val04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:val00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    VDBG_01545
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:val04121]
    VDBG_01545
   03400 DNA repair and recombination proteins [BR:val03400]
    VDBG_01545
Ubiquitin system [BR:val04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   Cul2 complex
    Adoptor protein
     VDBG_01545
   Cul5 complex
     VDBG_01545
DNA repair and recombination proteins [BR:val03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     VDBG_01545
SSDB
Motif
Pfam: Skp1_POZ
Other DBs
NCBI-GeneID: 9533440
NCBI-ProteinID: XP_003007357
UniProt: C9SAI8
LinkDB
AA seq 109 aa
MASYLSQSTHGSENKYVTLVSGDGYEFVLLREAVMISPVIKGMLDPRSQFMEAVSGRCVF
MEIRYREREDVPDMDIPVELCLELLVAADYLGLDTYAFDSSLLRGSNVY
NT seq 330 nt   +upstreamnt  +downstreamnt
atggcctcgtacttgtctcagagcacacacggctccgagaacaagtacgtgactctcgtc
tctggcgatgggtacgagtttgttctgctccgcgaggcggtcatgatcagcccggtcatc
aagggtatgctggatcctcgcagtcagttcatggaagcagtctcggggagatgtgtcttc
atggagatcaggtatcgcgaacgggaggacgtgcctgacatggacatacccgtcgagctc
tgtcttgagctgctagtcgcagctgactatcttggcttggacacatatgcgttcgattct
tcattactccgtggatcgaacgtctattag

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