Verticillium alfalfae: VDBG_03074
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Entry
VDBG_03074 CDS
T02227
Name
(RefSeq) AP-1 complex subunit beta-1
KO
K12392
AP-1 complex subunit beta-1
Organism
val
Verticillium alfalfae
Pathway
val04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
val00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
VDBG_03074
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
val04131
]
VDBG_03074
Membrane trafficking [BR:
val04131
]
Endosome - Golgi transport
Others
AP-1 complex
VDBG_03074
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Adaptin_N
Cnd1
HEAT_2
HEAT
HEAT_EZ
XMAP215_CLASP_TOG
HEAT_GCN1
PDS5
CLASP_N
AP5B1_middle
SCD
API5
Motif
Other DBs
NCBI-GeneID:
9533085
NCBI-ProteinID:
XP_003006935
UniProt:
C9SD00
LinkDB
All DBs
AA seq
636 aa
AA seq
DB search
MAVNRIRGAFAPPKKGETFELRAGLVSQYAYERKESIQKTIMAMTLGKDVSALFPDVLKN
IATGDLDQKKLVYLYLMNYAKSHPDLCILAVNTFVQDTEDPNPLVRALAIRTMGCIRVDK
MVDYMEEPLRKTLRDESPYVRKTAAICVAKLFDLNPAMCIENGFLESLQELISDSNPMVV
ANSVQALAEISETAPETRALVITPAILKKLLLALNECTEWGRVTILSTLADYPTQDVKES
EHICERVTPQFQHVNPSVVLAAVKVVFIHMRSINPETVRSYLKKMAPPLVTLVASAPEVQ
YVALRNIDLLLQAKPDILSKELRVFFCKYNDPPYVKLQKLEIMVRIANDKNFDQLLAELK
EYALEVDMDFVKRAVKAIGQVAIKIESASEKCVNALLDLIATKVNYVVQEVVVVIKDILR
KYPGYEGVIPTLCQYIDELDEPTARGSLIWIVGEYAEKISNADEILAGFVEVFMEEFTQT
QLQILTAVVKLFLKKPGSNQELVQKVLQSATTDNDNPDIRDRAYVYWRLLSGDLDVAKSI
VLSHKPAIATTMSSLPPALLEQLLSELSTLASVYHKPPESFVGKGRFGADELQRAAIREL
RQDAAENPIAASVAAAAAAATEQPPPQNNIENLLEN
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcaaccgcattcggggggctttcgctccgcccaagaagggagagacgtttgag
ttgcgtgccggcttggtgtctcaatatgcctatgagcgcaaggagtccattcagaagacg
atcatggctatgacgctaggcaaggacgtgtctgcgctgtttcctgatgtgctcaagaac
attgcaactggtgatctggaccagaagaagcttgtctacctttacctaatgaactacgca
aaatcgcatcccgacctctgcattctcgccgtcaacacgttcgtccaagatacagaagac
cccaacccattggttcgcgctctcgccattagaaccatgggctgcatccgtgtcgacaag
atggtcgattatatggaagaacccctgagaaagacgctccgagatgaatccccttacgtg
cgcaagacggccgccatttgtgttgcaaagctctttgacctgaacccggcaatgtgtatt
gagaatggcttcctagaatcgcttcaggagctgatcagcgactccaacccgatggtcgtc
gcaaactctgtccaagctctagcagagatcagcgagacggcgccggagacacgagctctc
gtcatcacccctgcgatattgaagaagctgctgcttgcgcttaatgagtgtacggagtgg
ggacgtgtcaccattctgtcgacactggccgactaccctacccaggacgtcaaggagtcg
gagcacatttgtgagagggtcacgccacagttccagcacgtcaacccgagcgtggtgctg
gcagctgtgaaggttgtcttcatccacatgagatcgatcaaccccgagaccgtccgatca
tacctgaagaagatggccccacctctggtgacgctggtagcctcggcccccgaggtgcag
tacgttgcgctgcgcaacatcgatcttttgctccaggccaagccagacattctcagcaag
gagttgcgagtcttcttttgcaaatacaacgatccgccgtatgtcaagctacagaagctt
gagattatggtgaggatagcaaacgacaagaactttgaccagttgctggccgagttgaag
gagtatgctttggaagtcgatatggatttcgtcaagagggccgtcaaggcgatcggccag
gtggccatcaagattgaatctgccagcgaaaagtgcgtcaatgcgcttctggatctgatt
gccaccaaggtcaactatgttgtgcaggaggtcgtcgtcgtgatcaaggacattctgcgc
aagtatcctggctacgaaggcgtcatcccgactctttgtcagtacatcgatgagctagac
gagccaacagcacgtggctcgttgatctggattgttggagagtacgccgagaagatcagt
aacgccgatgagattctcgccgggttcgtggaagtgttcatggaagaattcactcagact
caactgcaaattctcactgcggtggtgaagctcttcctcaagaagcccgggagcaatcag
gaattggtacagaaggtgctgcaatcagccacaacagacaacgacaaccctgatattcgc
gacagggcgtacgtttactggcgacttctgtcgggcgatctcgatgttgccaagagcatt
gttctgtctcacaagccggcgattgccactaccatgtccagtctacctcctgcgctgctc
gaacagcttctttcggagctctcgaccttggcctctgtctatcacaagccgcccgagtcg
ttcgttggcaagggacggttcggcgcggacgaactccagcgtgcggccatccgtgaacta
cgacaagatgcggcggagaacccgatcgcagcatcggtggcagctgcggcagcggcggca
acggaacagcccccaccacaaaacaacatcgagaatcttcttgaaaattga
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