Verticillium alfalfae: VDBG_08488
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Entry
VDBG_08488 CDS
T02227
Name
(RefSeq) pectin lyase
KO
K01732
pectin lyase [EC:
4.2.2.10
]
Organism
val
Verticillium alfalfae
Brite
KEGG Orthology (KO) [BR:
val00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
VDBG_08488
Enzymes [BR:
val01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.10 pectin lyase
VDBG_08488
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
9529497
NCBI-ProteinID:
XP_003001443
UniProt:
C9SU67
LinkDB
All DBs
AA seq
388 aa
AA seq
DB search
MTKLYALFSILAAVPVAIAQHRGTPFGFASGTTGGGSAGPVYPQNNQQLVSYLTDSQPRV
IMIDRTFDFLQTEGSVNTRCCRLNTCSNGLQPQSYIGNTCDGGTWVPCTYWNAPKNPIDV
KSNKSIVGVGSKGIIRGKALRLRGGVSNIIIQNIHFTELNPQYVWGGDAITLDGADRVWI
DHNKFSLVGRQMIVSGWGAAGKVTISDNEFDGRTSWSVSCNNKHYWALLLIGANDFYTFA
GNWLHDLSGRSPHLGTGDSSSNVVHVVNNYFQNIDGHALDIQGNAWSLLEGNYFDNVKEP
VSAGSGGGGAKIYDIRQVADAAKAQSALGYIPEWNRNGGSSGVPKVRLDQEALQKLGQHK
SAITWSHWKVENVPTNVKNNAGVGKIGN
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaactttacgctcttttttccatcctggcggcggtgcccgtggcgatagcccag
catcgaggcaccccattcggctttgcttccggcaccacgggcggtggtagtgcgggacca
gtctatccccaaaacaatcaacaactcgtcagctacctcactgacagccaaccccgtgtc
atcatgatcgatcgcacttttgacttccttcaaacagaagggagcgtaaacacgcgctgt
tgccgcctgaacacttgcagcaacggcttacagcctcagtcctacattggcaatacatgc
gacggcggtacctgggttccttgcacctactggaatgcccctaagaatcctatcgatgtc
aagagcaacaagtccatcgtcggtgtaggcagcaaaggtatcattcgcggcaaggcactc
cgtctgcgcggcggtgtgagcaacatcatcatccagaatatccacttcactgagctcaac
cctcagtacgtctggggcggtgatgctatcaccctggatggagctgacagggtctggatc
gaccacaacaagttttctctggtcggtcggcagatgattgtttctggttggggcgctgcc
ggaaaggtgacgatttccgacaacgagtttgacggcaggacgtcatggtccgtctcttgc
aacaacaagcactattgggccctgctgttgatcggcgccaacgacttttatacctttgct
ggcaactggttgcacgacctgtccggccgttcgccccacctgggcaccggtgacagctcg
tcaaacgtcgttcacgtcgtcaacaattatttccagaacatcgatggccacgctcttgac
atccagggcaacgcttggagtctacttgaagggaactacttcgataacgtcaaggagcct
gtctctgcgggcagcggcggtggcggcgctaagatctacgatattcgtcaggtagcggat
gctgccaaagcacagagcgcgcttggctacattcctgaatggaaccgaaacggcggtagt
agtggcgtgcccaaagtccgtctggaccaggaagctctacagaaactcggtcagcacaag
agcgctatcacatggtctcactggaaggtagagaacgtgcctaccaacgtgaagaacaat
gccggcgtggggaaaatcggcaattaa
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