Variovorax sp. PMC12: C4F17_02550
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Entry
C4F17_02550 CDS
T05380
Name
(GenBank) BMP family ABC transporter substrate-binding protein
KO
K07335
basic membrane protein A and related proteins
Organism
vam
Variovorax sp. PMC12
Pathway
vam02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
C4F17_02550
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vam02000
]
C4F17_02550
Transporters [BR:
vam02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
General nucleoside transporter
C4F17_02550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bmp
TAT_signal
UCR_Fe-S_N
Motif
Other DBs
NCBI-ProteinID:
AVQ79918
LinkDB
All DBs
Position
1:complement(566228..567280)
Genome browser
AA seq
350 aa
AA seq
DB search
MTSNASSRAATPRRQILKAAAGLGGVAMASALYPLIANAKGGLIALVHTQAAGDASAVDA
MIARLKLLGKETGMQTRAIYAKDPSTYETIFRTLGDAGAAIIVSTFNEVTEPFKALAPKY
PKTQWLQLFGDEMKPAIPNVTTVSYDYYLGTYLAGIFAGRMSTTGKIGFIGGMSIPPLNA
DYNAFKAGVLSVRKDAAVTVAFAGSFQDPVKGREIATQMFNGGIDFIQTDAAATDAGIIA
AANDKPGRLLSCLDPAQYPQGPKTLISIVSLHFGKSLYDEASKILKNGKGGAHLNTGLGT
GVVGLELSPLFQKEGDKAVAAKAEKVMAEIRTAQAAILSGALKVPFNTIL
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgacaagcaacgcatcctcccgcgccgccacgccccggcggcagatactgaaagccgcg
gccggccttggcggtgtcgccatggccagcgccctctatccgctgatcgcgaatgccaag
ggcgggctgatcgcgctggtgcacacgcaggctgcgggcgacgccagcgcggtcgacgcg
atgattgcgcggctcaagctgctgggcaaggaaacgggcatgcagacgcgcgccatctac
gcgaaggacccgtcgacctacgagaccatcttccgcacgctgggcgatgccggcgcggcc
atcatcgtgtcgaccttcaacgaagtgaccgagcccttcaaggcgctcgcgcccaagtac
ccgaagacgcagtggctgcagctgttcggcgacgagatgaagcccgccatcccgaacgtg
accaccgtctcctacgactactacctgggcacctacctggccggcatcttcgcggggcgc
atgtcgaccacgggcaagatcggcttcatcggcggcatgtcgatcccgccgctgaatgcc
gactacaacgccttcaaggccggcgtgctgtcggtgcgcaaggacgccgcggtcacggtg
gccttcgccggctcgttccaggacccggtgaagggccgcgagatcgccacgcagatgttc
aacggcggcatcgacttcatccagaccgacgccgccgcgaccgacgcgggcatcatcgcc
gccgccaacgacaagcccggccgcctgctgagctgcctcgacccggcgcaatacccgcag
ggtccgaagacgctgatttccatcgtcagcctgcacttcggcaagtcgctctacgacgag
gccagcaagatcctcaagaacggcaagggcggcgcgcacctgaacaccggcctgggcacc
ggggtggtgggcctggagctgtcgccgctgttccagaaggaaggcgacaaggccgtggcg
gccaaggccgaaaaggtgatggccgagatccgcaccgcgcaggcggccatcctgagcggc
gccctgaaggtgcctttcaacaccatcctctga
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