KEGG   Variovorax sp. PMC12: C4F17_14315
Entry
C4F17_14315       CDS       T05380                                 
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
  KO
K07799  membrane fusion protein, multidrug efflux system
Organism
vam  Variovorax sp. PMC12
Pathway
vam02020  Two-component system
Brite
KEGG Orthology (KO) [BR:vam00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    C4F17_14315
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:vam02000]
    C4F17_14315
Transporters [BR:vam02000]
 Other transporters
  Accessory factors involved in transport [TC:8]
   C4F17_14315
SSDB
Motif
Pfam: Beta-barrel_RND BSH_RND HH_MFP_RND BSH_CzcB RND-MFP_C YknX_C BSH_CusB BSH_YknX BSH_LcnD Beta-barrel_RND_2 Biotin_lipoyl DUF4429
Other DBs
NCBI-ProteinID: AVQ82037
LinkDB
Position
1:complement(3062539..3063732)
AA seq 397 aa
MSADKPAAKSAKAPGAGGAPGGSGGNGAPALVTLATAQKQDVPVTVQVNGSVVSLNSVDL
RPQVTNTVSAVHVKEGQFVKAGQLLFTLDDRNDQANLARARAQQQKDEATLADLERQYKR
SQDLVAQNFIAKSAADATLSQLEAQRAAVAADRAAVQSAQVALGYATLRAPIAGRIGAVN
IYPGTLVQPTLSLVTVTQLDPIAVSFPVPEGNLQDLLEAARSRSKVEAVVTGRKEPLAGT
LDFVDNTVDPLIGTVRAKAVFANADQGLWPGQFVGTRITVRTLNGVTVVPAAALMMLADG
TSLYVVDEAKTATRRKVKALHTFGTKVAVSGVEPGEQVVIEGSQNVRPGGKVRVDVKPPA
AAPGAPESPAKGTTGVTPGSAASSDGTDIKPPKQGRA
NT seq 1194 nt   +upstreamnt  +downstreamnt
atgtccgcagacaagccggccgcgaagagcgccaaggccccgggtgccggcggcgcgccc
ggcggcagcggcgggaacggtgcaccggcgctcgtgacgctggccaccgcgcagaagcag
gacgtgccggtgacggtgcaggtcaacggcagcgtggtctcgctcaacagcgtcgacctg
cgcccgcaggtaacgaacacggtgagcgcggtgcacgtgaaggaaggccagttcgtcaag
gcgggacaactgctcttcacgctcgacgaccgcaacgaccaggccaacctggcgcgcgcc
agggcccagcagcagaaggacgaggccacgctggccgacctcgaacgccagtacaagcgc
agccaggacctggtggcgcagaacttcatcgccaagagcgccgccgacgccacgctgtcg
cagctcgaggcgcagcgcgccgccgtggccgccgaccgcgccgccgtgcagtcggcccag
gtggcgctgggctacgccaccttgcgcgcgcccattgccgggcgcatcggcgccgtcaac
atctatccgggcacgctggtgcagccgacgctgtcgctggtcacggtcacgcagctcgac
ccgatcgcggtgagcttcccggtgcccgaaggcaacctgcaggacctgctggaggccgcg
cgctcgcgctcgaaagtcgaggcggtcgtcaccggccgcaaggagccgctggccggcacg
ctcgatttcgtcgacaacacggtcgatccgctgatcggcacggtgcgcgccaaggcggtg
ttcgccaacgccgaccagggcctgtggcccgggcagttcgtcggcacgcgcatcacggtg
cgcacgctcaacggcgtcacggtggtgcccgccgcggcgctgatgatgctggccgacggc
acgtcgctctacgtggtggatgaagccaagaccgccacgcgccgcaaggtgaaggcgctg
cacaccttcggcacgaaggtggccgtcagcggcgtggagcccggcgagcaggtggtgatc
gagggcagccagaacgtgcgcccaggcggcaaggtccgcgtcgacgtgaagccgccggcc
gctgcgcccggggctcccgagtctccggccaagggcaccacgggcgtcacgcccggcagc
gccgcgtcttcggacggcaccgacatcaagccgccgaagcagggacgggcatga

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