KEGG   Variovorax sp. PMC12: C4F17_14400
Entry
C4F17_14400       CDS       T05380                                 
Name
(GenBank) ribonucleoside-diphosphate reductase subunit alpha
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
vam  Variovorax sp. PMC12
Pathway
vam00230  Purine metabolism
vam00240  Pyrimidine metabolism
vam01100  Metabolic pathways
vam01232  Nucleotide metabolism
Module
vam_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
vam_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:vam00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    C4F17_14400
   00240 Pyrimidine metabolism
    C4F17_14400
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vam03400]
    C4F17_14400
Enzymes [BR:vam01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     C4F17_14400
DNA repair and recombination proteins [BR:vam03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    C4F17_14400
SSDB
Motif
Pfam: Ribonuc_red_lgC Ribonuc_red_lgN ATP-cone R-HINP1I
Other DBs
NCBI-ProteinID: AVQ82054
LinkDB
Position
1:3083594..3086509
AA seq 971 aa
MQTALTPQSTPRAVPSTPPQQQRDTAGSPNVQNLAHYQIIRRNGAVVPFEPNKIAIAMMK
AFLAVHGTQGAASASVRETVDVLTQGVIRALVRSRPGGGTFHIEDVQDQVELGLMRGGHH
EIARAYVLYRERRTQERSKQGEQQAPATPALHVLDNGELVALDINELKGLIESACENLGE
SITAAPIVAETMRNLYDGVPLDEVYKASILAARTLIEKDPDYTFATARLLLHTIFKEIIG
REVMPAERATAYADYFPQFIKKGVDNDLLDEKLLQYDLPRLGAALKAERDNQFDYLGLQT
LYDRYFLHVRKTRIELPQAFFMRVAMGLSLNEIDREARAIEFYEVLSSFDFMSSTPTLFN
AGTLRSQLSSCYLTTVPDDLDGIYESIKENALLSKFAGGLGNDWTRVRALGSHIKGTNGE
SQGVVPFLKVVNDTAVAVNQGGKRKGAVCTYLETWHLDIEEFLELRKNTGDDRRRTHDMN
TANWIPDLFMRRVMEKGTWTLFSPSNVPDLHDLFGAEFEKAYVAYEEKAARGDIKPARTI
QATDLWRKMLTMLFETGHPWITFKDACNVRSPQQHAGVVHSSNLCTEITLNTSDTETAVC
NLGSVNLLQHLKDGKVDQEKLKKTISTAMRMLDNVIDINYYAVKKARDSNLRHRPVGLGL
MGFQDALYELRIPYASQEAVQFADESMEAICYHAYWASTELARERGKYSSYKGSLWDKGI
LPIDSLDLLEKARGGYVEVDRSATLDWDALRQKIKADGMRNSNCVAIAPTATISNIIGVD
ASIEPCFGNLSVKSNLSGEFTVINHYLVRDLKRLGLWDDVMVMDLKHFDGSLRPIDRVPQ
DVKALYATAFEVETTWLVEAAARRQKWIDQAQSLNIYMAGASGKKLDDTYKLAWLRGLKT
TYYLRTQSATHAEKSTVQSGRLNAVSSGSDAPSGMSALEAAAAAAKAQMNAIPATDIAFC
GVDDPTCEACQ
NT seq 2916 nt   +upstreamnt  +downstreamnt
atgcaaactgccctgaccccccaatcgaccccgcgtgccgttccctcgacgccaccgcag
cagcagcgagacactgccggctcccccaacgtccagaacctggcccactaccagatcatc
cgccgcaacggcgccgtggtgcccttcgagccgaacaagatcgccatcgcgatgatgaag
gccttcctcgccgtgcacggcacgcagggcgcggcttcggccagcgttcgcgagacggtc
gacgtgctcacgcaaggcgtgatccgcgcgctggtgcgctcgcgtccgggcggcggcacc
ttccacatcgaagacgtgcaggaccaggtcgaactcggcctgatgcgcggcggccatcat
gaaatcgcgcgcgcctacgtgctgtaccgcgagcgccgcacgcaggagcgttcgaagcag
ggcgaacaacaagcgccggccacgcccgcgctgcacgtgctggacaacggcgagctggtc
gcgctcgacatcaacgagctcaagggcctgatcgaatccgcctgcgagaacctgggcgag
agcatcaccgccgcgccaatcgtcgccgagacgatgcgcaacctgtacgacggcgtgccg
ctcgacgaggtctacaaggcctcgatcctggccgcccgcacgctgatcgagaaggacccc
gactacaccttcgccaccgcgcgcctgctgctgcacacgatcttcaaggaaatcatcggc
cgcgaagtgatgcccgccgagcgcgccaccgcctatgccgactacttcccgcagttcatc
aagaagggcgtggacaacgacctgctcgacgaaaagctgctgcagtacgacctgccccgc
ctgggcgccgccctgaaggccgaacgcgacaaccagttcgactacctcggcctgcagacc
ctgtacgaccgctacttcctgcacgtgcgcaagacccgcatcgagctgccgcaggccttc
ttcatgcgcgtggccatgggcctgtcgctgaacgaaatcgaccgcgaagcccgcgccatc
gagttctatgaagtgctgtcgtcgttcgacttcatgtcgagcacgcccacgctgttcaac
gccggcacgctgcgctcgcagctgtcgagctgctacctgaccaccgtgccagacgacctg
gacggcatctacgagtcgatcaaggaaaacgcgctgctgtcgaagttcgccggcggcctg
ggcaacgactggacccgcgttcgcgcactcggcagccacatcaagggcaccaacggcgaa
tcgcagggcgtggtgccgttcctgaaggtggtgaacgacacggccgtggccgtgaaccag
ggcggcaagcgcaagggcgccgtctgcacctacctggaaacctggcacctcgacatcgag
gagttcctggagctgcgcaagaacaccggcgacgaccgccgccgcacgcacgacatgaac
accgccaactggatccccgacctgttcatgcgccgcgtgatggaaaagggcacctggacg
ctgttctcgccctccaacgtgcccgacctgcacgacctgttcggcgccgaattcgagaag
gcctacgtcgcctacgaagagaaggctgcccgtggcgacatcaagcccgcgcgcaccatc
caggcgaccgacctgtggcgcaagatgctcacgatgctgttcgagaccggccacccctgg
atcacgttcaaggacgcctgcaacgtgcgctcgccccagcagcacgccggcgtcgtgcac
tcgtcgaacctgtgcaccgagatcacgctgaacaccagcgacaccgaaaccgccgtgtgc
aacctcggctcggtgaacctgctgcagcatctgaaggacggcaaggtcgaccaggaaaag
ctcaagaagacgatctccacggcgatgcgcatgctcgacaacgtgatcgacatcaactac
tacgccgtgaagaaggcgcgcgactcgaacctgcgccaccgtccggtcggcctgggcctg
atgggcttccaggacgcgctgtacgaactgcgcattccctacgcctcgcaagaagccgtg
cagttcgccgacgagtcgatggaagccatctgctaccacgcctactgggcatcgaccgag
cttgcccgcgaacgcggcaagtactcgagctacaagggctcgctgtgggacaagggcatc
ctgccgatcgactcgctcgacctgctggaaaaggcacgcggcggctacgtcgaggtcgac
cgctcggccaccctcgactgggacgcgctgcgccagaagatcaaggccgacggcatgcgc
aattcgaactgcgtggccatcgctccgaccgcgaccatctcgaacatcatcggcgtggac
gcatcgatcgaaccctgcttcggcaacctgtcggtcaagtcgaacctgtcgggcgaattc
accgtgatcaaccactacctggtgcgcgacctgaagcgcctgggcctgtgggacgacgtg
atggtcatggacctgaagcacttcgacggctcgctgcgtccgatcgaccgcgtgccgcag
gacgtgaaggcgctctacgccaccgcgttcgaagtggaaaccacgtggctggtggaagcc
gccgcgcgtcgccagaagtggatcgaccaggcgcagtcgctgaacatctacatggccggc
gcatcgggcaagaagctcgacgacacgtacaagctcgcatggctgcgcggcctgaagacg
acctactacctgcgcacgcagagcgcgacgcacgccgagaagtcgacggtgcagtcgggc
cggctcaacgcagtgtcgtcgggcagcgatgcaccttcgggcatgagcgcgctcgaagcc
gctgcagcagcggcgaaggcgcagatgaacgcgattcccgccaccgacatcgcgttctgc
ggcgtggacgatccgacctgcgaagcctgccagtga

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