Variovorax sp. PMC12: C4F17_21725
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Entry
C4F17_21725 CDS
T05380
Name
(GenBank) BMP family ABC transporter substrate-binding protein
KO
K07335
basic membrane protein A and related proteins
Organism
vam
Variovorax sp. PMC12
Pathway
vam02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
C4F17_21725
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vam02000
]
C4F17_21725
Transporters [BR:
vam02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
General nucleoside transporter
C4F17_21725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bmp
AroM
Motif
Other DBs
NCBI-ProteinID:
AVQ83363
LinkDB
All DBs
Position
1:complement(4667714..4668823)
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AA seq
369 aa
AA seq
DB search
MPRTPSHGPVLGLAMTLAAGGALFTTLPAVAADGFTLKDKPKIAMLYFGPKNDGGWTQAF
DEARVKIEKEIGQKIQFVENVPEDASAIKPAAEKFIQRGANIVIGTAFGYSDSFKDLAAK
YPDVAFLNGSGTTNGSNLESFYGRTYESQYLCGMAAGAASKTGKLGFVAANPFGVVNWTI
NAFALGAQKMNPNATVNVIYTGAWNDPVKERAAAAALIDQGADVIGQHVDSPTPQIVAQE
RGVYGTGHHRDLRQFAPKATLCSSVWVWDRFLTPELKKIMAGNWKPAQYGAFIEMKDGGT
DIAGFGPAVPKDKAALITAERDAIMKGKQIYAGPLADRDGKERVAKGAVLSDADLWKMDW
FVKGVVTQK
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgcactccctcccacggccccgtcctcgggcttgccatgaccctcgcagccggc
ggcgcgctcttcaccacgctgcccgccgttgcggccgacggcttcacgctcaaggacaag
ccgaagatcgcgatgctctacttcggccccaagaacgacggcggctggacgcaggccttc
gacgaagcccgcgtgaagatcgagaaggagatcggccagaaaatccagttcgtcgagaac
gtgcccgaagacgcatcggccatcaagcccgccgcggagaagttcatccagcgcggcgcc
aacatcgtcatcggcaccgccttcggttactccgacagcttcaaggacctggccgccaag
taccccgacgtggccttcctcaacggctccggcaccaccaatggcagcaacctcgagtcg
ttctacggccgcacctacgagagccagtacctctgcggcatggccgcgggcgcggcgtcg
aagaccggcaagctcggcttcgtcgcggccaaccccttcggcgtggtgaactggaccatc
aacgccttcgcgctcggcgcgcagaagatgaacccgaacgccaccgtcaacgtgatctac
accggcgcgtggaacgacccggtgaaggaacgcgcggcagccgcggcattgatcgaccag
ggcgccgacgtgatcggccagcacgtcgacagccccacgccgcagatcgtggcgcaggag
cgcggcgtgtacggcaccggccaccaccgcgacctgcgccagttcgcgcccaaggccacg
ctgtgctcgtcggtgtgggtgtgggaccgcttcctcacgccggagctcaagaagatcatg
gccggcaactggaagccagcccagtacggcgccttcatcgagatgaaggacggcggcacc
gacatcgccggcttcggccccgccgtgcccaaggacaaggccgcgctcatcaccgccgag
cgcgacgcgatcatgaagggcaagcagatctacgccggcccgctcgccgaccgcgacggc
aaggagcgcgtcgccaagggcgcggtgctgtccgatgccgacctctggaagatggactgg
ttcgtcaagggcgtggtcacgcagaagtaa
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