Variovorax sp. PMC12: C4F17_23250
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Entry
C4F17_23250 CDS
T05380
Name
(GenBank) outer membrane protein assembly factor
KO
K07278
translocation and assembly module TamA
Organism
vam
Variovorax sp. PMC12
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vam02000
]
C4F17_23250
Transporters [BR:
vam02000
]
Other transporters
Pores ion channels [TC:
1
]
C4F17_23250
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Omp85
POTRA
POTRA_TamA_1
Motif
Other DBs
NCBI-ProteinID:
AVQ83633
LinkDB
All DBs
Position
1:complement(4987479..4989416)
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AA seq
645 aa
AA seq
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MVRVVPVSSPAWWPALLFSGVLLLQGCSLLPKKEPSEGKPVAGLVRGDSTASTTKDDRNA
DGKKDKADKRDAFTVDVRGPEAVRDYLALHLEIQRYRELDDLGATEISRLMVAAEANARE
LLGTLGYFTPTLTLELNETPQGAKAPREIVISVSPGEITKVSNVQISYGGPIADDAAAEA
QRDSIRTGWALRAGQPFTQEAWDAAKTTALRSLTAKRFPTGNIEISRAEIDADRQEARLS
VTYQSGPAYKFGPLVLRGIQRYDPDGARRIARLPSGQDYDQQKLLDAQQRLASSGYYDSV
FLTLDTESGNPLAAPVIAQLREAPLQKVVLGVGFTTDNGPRLSVDHIHNQVPLLGWRAVS
RLSVDRDIKSLSTELNAIPDDHGWRWFSGAELKSEQSGSYVVDSGRLRGGRNKSSDHIDR
SYFLQYDYAQNRGTNAPPSASAVTANWGWTGRYFDNNSAPTRGFGLALEVAAGYTLTGEQ
TPFTRTYARWLGVLPLGSSDDKETNARRSRLQLRLEGGAVAAKDSAQIPSTLMFLTGGDT
TVRGYSYKQIGTVRADGTTVAGRYLGVASVEWQRPFVYNNKLTDWESVMFVDAGAVADKP
AELKPKVGVGVGARWRSPVGPVQADLAYGVDSKKFRLHLRLGFTF
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atggtcagggtggttccagtttcctcgccggcgtggtggccggctttgcttttttccggc
gtcctgcttctgcaaggctgcagcctgctgccgaagaaggagccgtccgaaggcaagccc
gtggccggcctcgtgcgcggtgacagcaccgcaagtaccaccaaagacgacaggaacgca
gacggcaagaaggacaaggcggacaagcgcgacgccttcaccgtcgacgtgcgcggcccc
gaggccgtgcgcgactatctcgcgctgcacctcgaaatccagcgctaccgcgagctggac
gacctgggcgccaccgaaatctcccgcctcatggtggccgcagaggccaatgcccgcgag
ctgctgggcaccctcggctacttcacgcccacgctgacgctcgaactcaacgaaacgccc
cagggcgccaaggccccgcgcgagatcgtcatcagcgtctcgcccggcgagatcaccaag
gtgagcaacgtgcagatcagctacggcggcccgattgccgatgacgccgcggccgaggcc
cagcgcgactcgatccgcaccggctgggccctgcgcgccggccagcccttcacccaggag
gcctgggacgcggccaagaccaccgcgctgcgcagcctcacggccaagcgctttcccacc
ggcaacatcgagatcagccgcgccgagatcgatgccgaccgccaggaggcgcgcctgagc
gtcacctaccagtcaggtccggcctacaagttcggtccgctggtgctgcgcggcatccag
cgctacgaccccgacggcgcgcgccgcatcgcccgcctgcccagcggccaggactacgac
cagcagaagctgctcgacgcccagcagcggctggccagcagcggctactacgactcggtg
ttcctcacgctcgacaccgagagcggcaacccgctggccgcgcccgtcattgcgcagctg
cgcgaggcgccgttgcagaaggtggtgctgggcgtcgggttcaccaccgacaacggcccg
cgcctgtcggtcgaccacatccacaaccaggtgccgctgctaggctggcgcgcggtgtcg
cggctgtcggtcgaccgcgacatcaagtcgctgagcaccgagctcaacgccattcccgac
gaccacggctggcgctggttctccggtgccgagctgaaaagcgagcagtcgggcagctac
gtggtcgacagcggacgcctgcgcggcgggcgcaacaagtcgagcgaccacatcgaccgc
agctacttcctgcagtacgactacgcgcagaaccgcggcaccaacgcgcctccgtcggcc
tccgccgtcaccgccaactggggctggaccgggcgctacttcgacaacaactccgcgccc
acgcgcggcttcggccttgcgctggaagtggccgcgggctacacgctcacgggcgagcag
acgcccttcacccgcacctacgcgcgctggctcggcgtgttgccgctgggctcgagcgac
gacaaggaaaccaacgcgcgccgcagccgcctgcaactgcggctcgaaggcggcgcggtg
gcggccaaggacagcgcgcagatcccctccacgctgatgttcctgaccggcggcgacacc
accgtgcgcggctacagctacaagcagatcggcaccgtgcgcgccgacggcaccaccgtg
gccggccgctacctgggcgtggcgagcgtcgagtggcagcgccccttcgtctacaacaac
aagctcaccgactgggagagcgtgatgttcgtcgacgccggcgccgtggccgacaagccc
gccgagctcaagcccaaggtgggcgtgggcgtgggcgcgcgctggcgcagcccggtgggg
ccggtgcaggccgaccttgcctacggcgtggacagcaagaagttccgcctgcacctgcgc
ctcggcttcaccttctga
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