Variovorax sp. PMC12: C4F17_25365
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Entry
C4F17_25365 CDS
T05380
Symbol
fdnG
Name
(GenBank) formate dehydrogenase-N subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
vam
Variovorax sp. PMC12
Pathway
vam00630
Glyoxylate and dicarboxylate metabolism
vam00680
Methane metabolism
vam01100
Metabolic pathways
vam01120
Microbial metabolism in diverse environments
vam01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
C4F17_25365 (fdnG)
09102 Energy metabolism
00680 Methane metabolism
C4F17_25365 (fdnG)
Enzymes [BR:
vam01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
C4F17_25365 (fdnG)
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Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Motif
Other DBs
NCBI-ProteinID:
AVQ84008
LinkDB
All DBs
Position
1:complement(5411016..5413493)
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AA seq
825 aa
AA seq
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MASLAPTFGRGAMTNHWQDIQNADVVLIMGGNAAEAHPCGFKWVIEAKKQNKARLVVVDP
RFTRSAAMADYYAPVRAGSDIAFLSGVINYLLSNEKIQTEYVRNYTNAPFIVGPDYKFED
GIFSGYNAEKRNYDPKSWNYALDEQGMAKVDMTMQDPQCVLQVMKRHYSRYTPEMVSRIT
GTPQDKFLKVCEYIASTSTSTRTMTIMYALGWTQHSQGSQMIRTGAIVQLLLGNIGVAGG
GMNALRGHSNIQGLTDLGLLSNSLPGYMSLARDSEQTLEDYYKTRALKPLRPNQMSYWQN
YPKFFVSMQKSWWGDAATADNEWGFHYLPKIDKLYDVLQAFELMNQGKLNGYICQGFNPV
GSFPDKKKIVDGLSKLKFLVTIDPLVTETSEFWRNFGEFNDVKTTDIQTTVFRLPSTCFA
EEDGSLTNSSRWLQWHWKGAEPPGEAKGDIEIVAGIFNRMRQAYIKDGGAFPDPIVKLTW
PYKIPHSPSAQELAMEYNGRALVDLVDPKDPSKPPTAKAGEQLSGFGLLRDDGTTASGCW
IYSGAWTQAGNQMARRDNADPYGIGMVQNWAWAWPANRRILYNGASTDPTTGKPWIAKRS
LIAWNGKQWTGSDIPDIRPDANPMEADAVRPFIMTAEGVARLFAPTGMAEGPLPEHYEPF
ESPLVNNLMHPNNEKARANPAARIFKGDLERLGVPKDFPYVATSYRLTEHFHYWTKNVRT
SAIIQPQQFVEIGEELAKEKGIGHGDMVKVSSKRGFIKAVAVVTKRIVGLQVDGRTVHTV
GLPNHWGFVGVAKPGYLVNTLTPFVGDANTQTPEYKSFTVNIEKA
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
gtggccagtctggccccgacgttcggcagaggcgcgatgaccaaccactggcaggacatc
cagaacgcggatgtcgtgctgatcatgggcggcaacgcggcggaggcgcatccgtgcggc
ttcaagtgggtcatcgaggccaagaagcagaacaaggcgcgcctggtcgtggtcgacccg
cgcttcacgcgctcggccgccatggccgactactacgccccggtgcgcgcgggctcggac
atcgcgttcctctcgggggtcatcaactacctgctgagcaacgagaagatccagacggag
tacgtgcgcaactacaccaacgcgccgttcatcgtcgggcccgactacaagttcgaggac
ggcatcttcagcggctacaacgcagagaagcgcaactacgaccccaagtcgtggaactac
gcgctcgacgagcagggcatggccaaggtcgacatgaccatgcaggacccgcagtgcgtg
ctgcaggtcatgaagcggcactattcgcgctacacgccggagatggtgagccgcatcacc
ggcacgccgcaggacaagttcctgaaggtgtgcgagtacatcgcgagcaccagcacgtcc
acgcgcaccatgaccatcatgtatgcgctgggctggacgcagcacagccagggctcgcag
atgatccgcaccggcgccatcgtgcagctgctgctgggcaacatcggcgtggcgggcggc
ggcatgaacgcgctgcgcgggcacagcaacatccagggcctgaccgacctggggctgctg
tcgaactcgctgccgggctacatgtcgctcgcgcgtgacagcgagcagaccctggaggac
tactacaagacccgcgcgctgaagccgctgcggcccaaccagatgagctactggcagaac
tacccgaagttcttcgtcagcatgcagaagtcgtggtggggcgacgcggccacggccgac
aacgagtggggcttccactacctgcccaagatcgacaagctctacgacgtgctgcaggcc
ttcgagctcatgaaccagggcaagctcaacggctacatctgccagggcttcaacccggtg
ggctcgttcccggacaagaagaagatcgtcgacgggctctccaagctcaagttcctcgtc
accatcgatccgctggtgacggagaccagcgagttctggcgcaacttcggcgagttcaac
gacgtcaagaccaccgacatccagaccacggtgttccgcctgccttccacctgcttcgcg
gaggaagacggctcgctcaccaactccagccgctggctgcagtggcactggaagggcgcg
gagccgccgggcgaggccaagggcgacatcgagatcgtggcgggcatcttcaaccgaatg
cgccaggcctacatcaaggacggcggcgccttccccgacccgatcgtcaagctgacctgg
ccctacaagattccgcactcgccttccgcgcaggaactggcgatggaatacaacggccgc
gcgctggtcgacctggtcgatccgaaggacccgagcaagccgccgacagccaaggcgggc
gaacagctctccggcttcggcctcttgcgcgacgacggcaccaccgccagcggctgctgg
atctacagcggcgcctggacgcaggccggcaaccagatggcgcggcgcgacaacgccgac
ccgtacggcatcggcatggtgcagaactgggcgtgggcctggcccgcgaaccggcgcatt
ctctacaacggcgcctccaccgatcccaccaccggcaagccgtggatcgccaaacgcagc
ctcatcgcgtggaacggcaagcagtggaccggctcggacattcccgacattcggcccgac
gccaacccgatggaagccgacgcggtgcgcccattcatcatgacggccgagggcgtggcg
cggctgttcgcgcccacgggcatggccgaagggccactgccggagcactacgagcccttc
gagtcgccgctggtcaacaacctgatgcacccgaacaacgagaaggcgcgcgccaacccc
gcggcgcgcatcttcaagggtgacctcgagcggctcggcgtgccgaaggactttccatac
gtggcaaccagctaccggctcaccgagcacttccactactggaccaagaacgtgcgcacc
tcggccatcatccagccgcagcagttcgtcgagatcggcgaagagctggcaaaggaaaag
ggcatcggccacggcgacatggtgaaggtgtcgagcaagcgcggcttcatcaaggcggtg
gccgtggtgaccaagcgcatcgtcgggctgcaggtcgatggccgcacggtgcacacggtg
gggctgccgaaccactggggcttcgtcggcgtggccaagccggggtatctggtgaacacg
ctcacgcctttcgtcggcgatgcgaacacgcagacgcccgagtacaagtcgttcacggtg
aacatcgagaaggcgtga
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