KEGG   Variovorax sp. PMC12: C4F17_26045
Entry
C4F17_26045       CDS       T05380                                 
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
  KO
K07799  membrane fusion protein, multidrug efflux system
Organism
vam  Variovorax sp. PMC12
Pathway
vam02020  Two-component system
Brite
KEGG Orthology (KO) [BR:vam00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    C4F17_26045
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:vam02000]
    C4F17_26045
Transporters [BR:vam02000]
 Other transporters
  Accessory factors involved in transport [TC:8]
   C4F17_26045
SSDB
Motif
Pfam: BSH_RND Beta-barrel_RND HH_MFP_RND RND-MFP_C YknX_C BSH_CzcB Beta-barrel_RND_2 BSH_CusB CzcB_C HH_EMRA Biotin_lipoyl BSH_YhbJ BSH_YknX She9_MDM33
Other DBs
NCBI-ProteinID: AVQ84136
LinkDB
Position
1:5549599..5550834
AA seq 411 aa
MTTTLTTATGHPLFQRRSTWLATAALVLVLGGGTWALTHHSAHAAKPEAAQAAPPVQVTT
ARVKQQDVQVYRSGIGTVASMATVTVKARIDGQLDKVGFVEGQDVKAGQMLAQLDPRTLQ
AQLAQAQATRAKDQATLANARADLKRYTTLIAQDAATQQQLDTQKALVNQLEATVQNDAA
QVKYAEVQLSFTRISSPMDGRVGARLVDPGNIVHAADTNGLVVINQIDPIAVQFTLPEDA
VQDINRLQQKSSQPLTVVAYDRSGAQMLGTGKLILLNNQIDTTSGTVQLKGSFANPQHSL
WPGQYVNVRLQLDRRPDSLTVPAAAVQRGQDSTYVWVVDDQNKVGNVPVHVVQIADGTAV
IDKGLSANQRVVVDGQYKLKPGATVVEPPPAQKGAAGGGTDANKPAGGSSN
NT seq 1236 nt   +upstreamnt  +downstreamnt
atgacgaccacactcaccaccgccaccgggcaccctctgttccagcgccgatcgacctgg
ctcgccaccgccgcgctcgtgctcgtgctgggcggcggcacctgggcgcttacccaccat
tccgcccatgccgccaagcccgaggccgctcaggcagcgccaccggtgcaggtgaccacg
gcgcgcgtcaagcagcaggacgtgcaggtctaccgcagcggcatcggcaccgtggcgtcg
atggccaccgtcaccgtcaaggcccgcattgacgggcagctcgacaaggtcggcttcgtg
gaagggcaggacgtgaaggccggccagatgctcgcgcagctcgacccacgcacgctgcag
gcgcagctcgcgcaggcgcaggccacccgggcgaaggaccaggccacgcttgccaacgcc
cgcgccgacctcaagcgctacaccacgctgatcgcgcaggacgcggccacgcagcagcag
ctcgacacgcagaaggcgctggtcaaccagctcgaggccaccgtgcagaacgatgccgcg
caggtgaagtacgccgaagtgcagctcagcttcacgcgcatctcgtcgcccatggacggg
cgcgtcggcgcgcggctggtggaccccggcaacatcgtgcacgcggccgacaccaacggg
ctggtggtcatcaaccagatcgaccccatcgccgtgcagttcacgctgcccgaagacgcg
gtgcaggacatcaaccgcctgcagcagaaaagcagccagccgctcacggtggtggcctac
gaccgcagcggcgcgcagatgctgggcaccggcaagctcatcctgctgaacaaccagatc
gacaccaccagcggcaccgtgcagctcaagggcagcttcgccaacccgcagcattcgctg
tggcccggccagtacgtcaacgtgcggctgcagctcgaccgccggcccgactcgctcacc
gtgcccgccgccgccgtgcagcgcggccaggacagcacctacgtctgggtggtcgatgac
cagaacaaggtcggcaacgtgccggtgcacgtggtgcagatcgccgacggcacggccgtg
atcgacaagggcctgagcgcgaaccagcgcgtggtggtggacggccagtacaagctcaag
cccggcgccaccgtcgtggagccgccgcccgcgcagaagggcgcggccggtggcggcacc
gacgccaacaagcccgccggcgggagcagcaattga

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