Vibrio anguillarum 775: VAA_01742
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Entry
VAA_01742 CDS
T01536
Name
(GenBank) Excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
van
Vibrio anguillarum 775
Pathway
van03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
van00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
VAA_01742
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
van03400
]
VAA_01742
DNA repair and recombination proteins [BR:
van03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
VAA_01742
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
VAA_01742
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_16
AAA_29
nSTAND1
DnaJ_CXXCXGXG
RsgA_GTPase
AAA_23
NACHT
Viral_helicase1
AAA_25
Zn_Tnp_IS1595
Motif
Other DBs
NCBI-ProteinID:
AEH34326
LinkDB
All DBs
Position
I:2970231..2973056
Genome browser
AA seq
941 aa
AA seq
DB search
MMDKIEVRGARTHNLKNINLTIPRDKLTVITGLSGSGKSSLAFDTLYAEGQRRYVESLSA
YARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEVYDYLRLLYARVGEPR
CPEHKVPLRAQTISQMVDKVLELAEGSKLMLLAPIVKERKGEHVKTLENLAAQGFIRARI
DGETCDLTDPPTLELHKKHTIEVVVDRFKVRPDLQQRLAESFETALELSGGIAVVTDMDG
EGEQIVFSANFACPHCGYSMQELEPRLFSFNNPAGACHTCDGLGVQQYFDPERVIQDSQL
SLAQGAIRGWDQKNYYYFQMLTSLAAHYDFDLHTPFNKLPKKVQEIILKGSGKTEIEFNY
INDRGDIRVKRHPFEGILNTLERRYRDTESNSVREDLVKYISTKPCTSCNGTRLRIEARN
VFINDTALPEVVELSIADALQFFQSLDLEGQRAQIAEKVMKEINDRLHFLVNVGLNYLNL
SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLKTLTHLRDLGNT
VLVVEHDEDAIRMADHVIDIGPGAGVHGGQVVAEGNVNDIISNPNSLTGQYLSGAKKIAI
PTVRTPRDPKKTVELIGASGNNLKTVDLSIPVGLFSCVTGVSGSGKSTLINDTFFKIAHT
ALNGATTATPAPYQKIKGLEHFDKVIDIDQSPIGRTPRSNPATYTGIFTPIRELFSGTQE
SRSRGYKPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDVYVPCDVCKGKRYNRETLEVRY
KGKAIDEVLEMTVEDAYAFFEPVPMIARKLKTLIDVGLSYIRLGQAATTLSGGEAQRVKL
ARELSKRDTGKTLYILDEPTTGLHFHDIQQLLTVLHRLRDHGNTVVVIEHNLDVIKTADW
VIDLGPEGGQGGGEIIAQGTPEDVAQIEGSHTARFLKPMLK
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgatggacaaaattgaagttaggggcgctcgaacccacaacctgaaaaatatcaacctg
accattccacgcgataaactaacggtgattacagggctatcaggctcggggaagtcgtct
ctcgcctttgatacactctacgcagagggccaacgccgctatgttgaatcgctgtctgcc
tatgcacgccaatttttatctttgatggaaaaaccggatgttgaccatattgaaggtctt
tcaccggctatctctattgaacaaaaatcaacctcgcataaccctcgttctacggttggc
accattactgaagtttatgactacttacgtctgctttatgcgcgagtcggtgagccgcgc
tgcccagagcacaaagttccacttcgcgctcaaaccatcagccaaatggttgataaggtg
ttggaattagctgaaggctcaaaactgatgctgcttgcaccgattgtgaaagagcgcaaa
ggtgaacacgttaaaacgctggaaaacttagccgcgcaaggttttatccgtgcccgcatt
gatggtgaaacgtgcgatctgactgatccaccaacccttgagctgcacaaaaagcacacc
attgaagtggtggttgatcgctttaaagttcgtcctgacctacagcagcgcctagccgaa
tcctttgagacagcgctcgagttgtcaggcggtattgctgtggttactgatatggatggt
gaaggcgaacagattgtattctcagccaattttgcttgtccacactgtggctacagtatg
caggagttagagcctcggctgttttcatttaataacccagcgggcgcatgccacacctgt
gatggtttaggcgtacaacaatattttgaccctgaacgcgttatccaagatagccaactc
agcctcgcgcaaggagcgattcgtggctgggatcagaaaaattactactacttccagatg
ctcacgtcactcgctgcgcattatgattttgatttgcataccccatttaacaaactgccc
aaaaaggttcaggaaatcatcttgaaaggctcggggaaaactgagattgagtttaactac
attaacgatcgtggtgatattcgggttaaacgccatccgtttgaaggcattctcaataca
cttgaacggcgttatcgcgatacagaatctaactctgtccgtgaagatttggtgaaatac
atctcgactaagccttgtaccagttgtaatggcacccgtttacgcatcgaagctcgcaac
gtatttatcaatgacaccgcgctcccggaagtggtggaactgagcattgccgatgccttg
caattttttcaatctcttgatttagaaggccaacgagcacaaattgctgaaaaagtaatg
aaagagatcaatgaccgtttgcatttcctcgtcaacgttgggttgaattatctcaacctt
tctcggagtgctgaaaccctgtcaggaggcgaagcacaacggattcgcttagcgagccaa
attggcgctggactcgttggggtaatgtacgtcttagatgagccatcgattgggctccac
cagcgtgataacgaacggctattaaaaacgctcacgcatttgcgcgatctaggcaacacg
gtattggttgtagagcatgacgaagacgcaattcgtatggccgatcatgtaattgatatt
ggccctggcgctggtgtgcatggtggacaagtcgtcgcagaagggaatgtgaatgacata
atttccaaccctaattcgctcacaggacagtacctgagcggcgcgaaaaaaattgcgatt
cctaccgtgcgtaccccgagagatcccaagaaaacggtggagcttatcggcgcgtcgggt
aacaacctcaagacggttgatttatcaattcctgttggcttatttagctgcgtaaccgga
gtttcaggctccggtaaatcaaccttaattaatgataccttttttaaaattgctcatacg
gccttaaatggagccaccacagcaacgcctgctccatatcaaaaaatcaaagggttagag
cattttgataaggtcatcgacattgaccagagcccgataggccgaactccccgttcaaac
ccggccacctatacaggcattttcacgccgatccgcgagctattctcgggcactcaagag
tctcgctctcggggctataaaccgggtcgttttagctttaacgtacgtggtggacgctgc
gaagcatgccaaggtgatggtgtgattaaggttgagatgcactttttacccgatgtttac
gtgccatgcgatgtgtgtaagggcaaacgctataatcgtgaaacattggaagtccgctac
aaaggcaaagcgattgatgaagtgttggagatgaccgtcgaagatgcttacgcttttttt
gagcccgtaccgatgatcgctcgcaaactcaagactttgattgacgtgggtttatcctac
atacgcctcggacaagcggcgacgacattgtcagggggcgaagctcaacgcgtcaaactg
gctcgtgaactatcaaagcgcgatacaggaaaaaccttgtacattttggatgagccaacg
actggcttacacttccatgatatccaacagctcttgaccgtactgcatcgcctacgcgac
cacggcaataccgtggtggtgattgaacacaacttagatgtgattaaaaccgcagactgg
gtgatcgacttagggccagaaggtggacaaggcggcggcgaaattattgctcaaggaacg
cccgaagatgtggcgcagatcgaaggttcacacacagcacgctttcttaagcctatgttg
aaatag
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