Vibrio anguillarum 775: VAA_03115
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Entry
VAA_03115 CDS
T01536
Name
(GenBank) Excinuclease ABC subunit C
KO
K03703
excinuclease ABC subunit C
Organism
van
Vibrio anguillarum 775
Pathway
van03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
van00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
VAA_03115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
van03400
]
VAA_03115
DNA repair and recombination proteins [BR:
van03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
VAA_03115
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GFIT
Motif
Pfam:
UvrC_RNaseH_dom
GIY-YIG
HHH_5
UVR
HHH
HHH_2
HHH_3
5_3_exonuc
CCDC90-like
Motif
Other DBs
NCBI-ProteinID:
AEH32946
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Position
I:1442178..1444010
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AA seq
610 aa
AA seq
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MTSLFDSVAFLKTVTHQPGVYRMYNAEADIIYVGKAKDLKKRLSSYFRKTIDSEKTRALV
SHIDKIDVTVTHTETEALILEHNYIKQYLPKYNVLLRDDKSYPYIFISGHKHPRLSLHRG
AKKRKGEYFGPYPDSGAVRESLHLIQKIFPVRQCEDTVYSNRTRPCLMYQIGRCAAPCVS
HIIADEEYAELVNYVRLFLQGKDNQVLETLVQKMEQASQALQFENAAKFRDQIQAIRRVQ
EQQFVSEETMDDMDILGFAQENGIACIHILMIRQGKILGSRSHFPKIPANTTQEEVFDGF
LGQYYLSHNEARTIPSRVILNAGLLEDEKPLQEALQTLVGRKVSFHISPTGVRAQYLKLA
NTNALSAITAKINHRMTINQRFKALQAVLGLDSIERMECFDISHTMGESTIASCVVFNQE
GPVKPEYRRYNITGITGGDDYAAMGQVLDKRYSKQLDVEKIPDVIFIDGGKGQLNRALQI
ISSHWQDWPKRPVMIGIAKGVTRKPGLETLITTDGDEFNLPSDAPALHLIQHIRDESHNH
AIAGHRAKRGKTRRTSTLEGIEGVGPKRRQALLKYMGGLQELKRATVEEIAKVPGISHSL
AENIYQALKQ
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
gtgacttctttgttcgactcggtcgcttttcttaaaaccgttacccatcagcccggcgtt
tatcgaatgtataacgccgaggctgatatcatctatgttggcaaagccaaagacctcaaa
aaacgcctttctagttactttcgaaaaacaatcgacagtgagaaaacgcgcgcgttggtc
agccatatcgataaaattgatgtcaccgttactcacactgaaacggaagcgttgatcctt
gaacacaattacatcaagcaatatttgcctaaatacaatgtgctgctgcgagatgataaa
tcttacccgtatatttttattagtgggcataagcaccctcgtttgtcgttgcaccgtggc
gcgaaaaagcgcaaaggtgagtattttggtccataccctgattctggtgcggttcgagag
tcgttacacctcatccaaaaaatatttccggtaagacaatgtgaagataccgtctatagc
aaccggactcgtccttgtctgatgtatcaaattggccgctgcgctgcaccttgtgtgagt
catatcattgcggatgaagagtatgctgaattggttaattatgttcgattgtttttgcaa
ggcaaagataaccaagtacttgaaacattagtgcaaaaaatggaacaagccagccaagca
ctgcagtttgaaaatgccgctaaatttagagaccagatccaagccattcgaagagtccaa
gaacaacagtttgtttctgaagagacgatggatgacatggatatattgggatttgcccaa
gaaaatggcatcgcttgcatccatattttgatgatccgccaaggtaaaatattgggtagt
cgtagccattttcctaaaattccggctaacacgactcaagaagaggtgtttgatggcttt
ttaggacagtattatttaagtcacaatgaagcgcgtacgatcccaagtcgagtgatctta
aatgcgggtctgctagaggatgaaaagccgctgcaagaagcattacagaccctggtcggg
cgtaaagtttctttccacatcagcccaacaggtgtgcgtgctcaatatttaaaattggct
aataccaatgcattgagcgcaataacggctaaaattaaccatagaatgacgatcaaccag
cgttttaaagcacttcaagctgttttagggttggatagcatagagcgtatggagtgtttt
gatatttcgcacaccatgggagagagcacgatcgcctcatgcgtggtatttaaccaagaa
gggcctgttaaaccagaataccgccgttataacatcacgggaattactggtggggatgat
tacgctgcaatgggacaagtgttagataagcggtattccaagcagcttgacgtggaaaaa
atccccgatgtcattttcattgatggtggtaaagggcaattgaatcgagctttgcagatc
atctctagccattggcaagattggccgaaaagaccggtgatgattggtatcgccaaaggc
gttacccgcaaaccggggctagaaacgttgattacaaccgatggcgatgaatttaacctg
ccaagtgatgcgccagctttgcatttgattcagcatattcgcgatgaaagtcataatcac
gccattgctgggcatagagccaaacgaggtaaaacacggcgtaccagtacattggaaggc
atagaaggggttgggcctaaacgccggcaagcactgctgaaatatatgggagggctgcaa
gagctaaaaagagccactgttgaagaaatcgccaaagtgcccggtattagccattcttta
gctgaaaacatttatcaagcattgaaacaataa
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