KEGG   Variovorax paradoxus S110: Vapar_0970
Entry
Vapar_0970        CDS       T00916                                 
Name
(GenBank) efflux transporter, RND family, MFP subunit
  KO
K07799  membrane fusion protein, multidrug efflux system
Organism
vap  Variovorax paradoxus S110
Pathway
vap02020  Two-component system
Brite
KEGG Orthology (KO) [BR:vap00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    Vapar_0970
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:vap02000]
    Vapar_0970
Transporters [BR:vap02000]
 Other transporters
  Accessory factors involved in transport [TC:8]
   Vapar_0970
SSDB
Motif
Pfam: Beta-barrel_RND BSH_RND HH_MFP_RND BSH_CzcB RND-MFP_C Beta-barrel_RND_2 YknX_C BSH_CusB BSH_YknX BSH_LcnD Biotin_lipoyl
Other DBs
NCBI-ProteinID: ACS17621
UniProt: C5CNK5
LinkDB
Position
1:1068160..1069287
AA seq 375 aa
MAAKNARPAAAGGAPADGAPAALVTLATAERQDVPVTVQVNGSVVSLNSVDLRPQVTNTV
AAVHVKEGQFVKEGQLLFTLDDRNDQANLARARAQQKRDEATLADLERQYKRSQELLAQN
FISKSATDATLSQLEAQRAAVAADRAAVQSAQVALGYATLRAPIAGRIGAVNIYPGTLVQ
PTLSLVTITQLDPIAVSFPVPEANLQDLLAAARSRAKVEALVVGRREPLSGVLNFVDNTV
DPQIGTVRAKAVFDNADQSLWPGQFVGTRITVRTLSGATVVPAAALMMLSEGASLYVVDQ
AMNAKRRKVQVLHTFGTKVAVSGVEPGEQVVIEGSQNVRPGGKVRADKKAAPAGTTGVTP
GSAASSDTQAPRERA
NT seq 1128 nt   +upstreamnt  +downstreamnt
atggcggcaaagaacgccaggccagccgccgccggtggcgcccccgcagacggcgcgccg
gccgcgctcgtcacgcttgccaccgccgagcggcaggacgtgccggtcacggtgcaggtc
aacggcagcgtggtgtcgctcaacagtgtcgatctgcggccgcaggtgaccaacaccgtg
gcggcggtgcacgtgaaggaagggcagttcgtcaaggagggccagctgctcttcacgctc
gacgaccgcaacgaccaggccaacctggcccgcgcccgcgcccagcaaaagcgcgacgaa
gccaccctggccgacctcgagcgccaatacaagcgcagccaggaactgctggcgcagaac
ttcatttccaagagcgccacggacgccacgctgtcgcagctggaagcgcagcgcgccgcg
gtggcggccgaccgcgccgcggtgcaatcggcgcaggtggcgctgggctacgccacgctg
cgcgcgcccattgcggggcgcatcggggccgtgaacatctatcccggcacgctggtgcag
ccgacgctgtcgctggtcaccatcacgcagctcgatcccatcgcggtgagcttcccggtg
ccggaggccaacctgcaggacctgctggcggcggcgcgcagccgggccaaggtggaggcg
ctggtcgtcggacgccgcgagccgctcagcggcgtgctcaatttcgtcgacaacacggtc
gatccgcagatcggcacggtgcgcgccaaggcggtgttcgacaacgccgaccagagcctc
tggccgggccagttcgtcggcacccggatcacggttcgcacgctctccggcgccacggtg
gtgccggccgcggcgctcatgatgctgtccgagggcgcttcgctctacgtggtcgaccag
gccatgaatgccaagcgccgcaaggtgcaggtgctccacaccttcggcaccaaggtggcg
gtgagcggcgtcgagccgggcgagcaggtggtcatcgagggcagccagaacgtgcgcccg
ggcggcaaggtcagggccgataaaaaggccgcgccggccggtaccaccggcgtcacgccg
ggcagtgcggcctcctcggacacccaggctccccgggaacgcgcatga

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