KEGG   Variovorax paradoxus S110: Vapar_3461
Entry
Vapar_3461        CDS       T00916                                 
Name
(GenBank) iron-sulfur cluster binding protein
  KO
K18979  epoxyqueuosine reductase [EC:1.17.99.6]
Organism
vap  Variovorax paradoxus S110
Brite
KEGG Orthology (KO) [BR:vap00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:vap03016]
    Vapar_3461
Enzymes [BR:vap01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.99  With unknown physiological acceptors
    1.17.99.6  epoxyqueuosine reductase
     Vapar_3461
Transfer RNA biogenesis [BR:vap03016]
 Prokaryotic type
  tRNA modification factors
   Other tRNA modification factors
    Vapar_3461
SSDB
Motif
Pfam: Fer4_16 QueG_DUF1730 Fer4_9 Fer4_7 HEAT_2 Fer4_10 Fer4 HEAT_EZ Fer4_21 Fer4_8 Fer4_6 Fer4_18
Other DBs
NCBI-ProteinID: ACS20078
UniProt: C5CSX1
LinkDB
Position
1:complement(3645157..3646245)
AA seq 362 aa
MIVSHPLVARIQALARELGFSQIGIAGVDLSSAEEGLMQWLAHGFHGEMKYMATHGTRRA
RPAELVPGTVSVITARMDYLPRGTPLDDWQAVEFDRLSRPGEAIVSVYARGRDYHKVMRA
RLARLAERIAEEVGPFGHRAFTDSAPVLEAELASRSGQGWRGKHTLVLDRSAGSMFFLGE
IYVDMALPESEPVSAHCGSCSACIDVCPTKAIVAPYRLDARRCISYLTIEHGGPIPLELR
PLMGNRIYGCDDCQLICPWNKFAKKSALPDFDAREGLTGQSLAALFAWSEEEFLRFTEGS
PIRRIGHERWLRNIAVALGNALRAGESGAAEALATRASDPSELVREHVAWALAQRPETPN
AS
NT seq 1089 nt   +upstreamnt  +downstreamnt
gtgatcgtcagccatccactcgttgctcgtattcaggcattggcccgggaactcggattc
tcccaaatcggaatcgcgggcgtcgatttatcgagcgccgaggaaggtctgatgcaatgg
ctggcccatgggttccatggcgagatgaaatacatggcaacgcacggcacgcgccgcgcg
cggccggccgagctggtgccgggcacggtgagcgtcatcacggcgcgcatggactacctg
ccgcgcggcacgccgctcgacgattggcaggccgtggagttcgatcgcctctcgcggccc
ggcgaggccatcgtctcggtctatgcgcgcggccgcgactatcacaaggtgatgcgtgcc
cggctggcccggctggccgagcgcatcgccgaagaagtgggcccgttcggccaccgcgcc
ttcaccgattcggcgccggtgctcgaagccgagcttgcatcccgcagcggccagggctgg
cgcggcaagcacacgctggtgctggaccgcagcgcgggctcgatgttcttcctgggcgag
atctacgtcgacatggcgctgcccgaaagcgagccggtcagcgcgcactgcggcagctgc
agcgcctgcatcgacgtgtgcccgaccaaggcgatcgtcgcgccgtaccggctcgatgcg
cggcgctgtatttcgtacctcaccatcgagcacggcgggccgattccgctggagcttcgg
ccgctgatgggcaaccgcatctacggctgcgacgattgccagctgatctgcccctggaac
aagttcgcgaagaagagcgcgctgcccgacttcgatgcgcgcgaggggctcaccggccag
tcgctggccgcgctctttgcctggagcgaagaggaatttctgcgcttcaccgaaggcagc
ccgatccgccgcatcggccatgaacgctggctgcgcaacatcgccgtggcccttggcaac
gcactgcgcgcgggcgaaagcggcgccgcagaggccctggccacgcgggcctcggacccg
agcgaactggtgcgcgagcacgtggcgtgggcgctggcgcagcgccccgaaacgccgaac
gcgtcctag

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