Variovorax paradoxus S110: Vapar_3900
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Entry
Vapar_3900 CDS
T00916
Name
(GenBank) basic membrane lipoprotein
KO
K07335
basic membrane protein A and related proteins
Organism
vap
Variovorax paradoxus S110
Pathway
vap02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Vapar_3900
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vap02000
]
Vapar_3900
Transporters [BR:
vap02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
General nucleoside transporter
Vapar_3900
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bmp
DEC-1_N
Motif
Other DBs
NCBI-ProteinID:
ACS20514
UniProt:
C5CVL1
LinkDB
All DBs
Position
1:complement(4132127..4133299)
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AA seq
390 aa
AA seq
DB search
MNDLNKRSLLKLAALTAVASAALIGCGKKEEAAAPAATPAPAPAPAAAAPAPAAPLNIAF
AYIGPVGDGGWTFAHDNGRKALEKEFGDKIKTTFVESVPEGADAERVFRDMVGQGNKLVF
GTTFGYMEPMLKVAADSKDVKFEHATGYKTAENMRTYDSRTYEGAYMAGVIAGAMTKSNT
LGVVGSVPIPEVLRNINSFTLGAQSVNPKITTKVVWVNEWFSPPKETEAATALINGGADV
LFQNTDSPAVLKTAQEKGKRAFGWDSDMTAYGPKAHLASATINWAPYYIKATQDALDGKW
ATGQAWWGVKEGAIDLVSIAEDVPAETKAKVEEVKKGLKDGSFAIWKGPILGQDGKEVVA
KDAVADDKFLSGVNFYVKGVEGKVPGGDKK
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatctgaacaagcgctccctgctcaagctggccgccctcacggcggtcgcttcg
gcggccctgatcggctgcggcaagaaagaggaagcggctgcaccggctgcaacccccgcg
ccggcgccggcacccgctgccgccgctccggcaccggcagcgccgctcaacatcgcattc
gcatacatcggcccggtgggcgacggcggctggaccttcgcgcacgacaacggccgcaag
gcgctcgagaaggaattcggcgacaagatcaagaccaccttcgtcgagagcgtgcccgag
ggcgccgacgccgagcgcgtgttccgcgacatggtcggccaaggcaacaagctggtcttc
ggcaccaccttcggctacatggagccgatgctcaaggtggccgccgacagcaaggacgtg
aagttcgagcatgccaccggctacaagaccgccgagaacatgcgcacctacgacagccgc
acctacgaaggcgcctacatggccggcgtcattgccggcgccatgaccaagagcaacacg
ctcggcgtggtcggctcggtgccgattcccgaggtgctgcgcaacatcaacagcttcacg
ctgggcgcgcagtcggtcaacccgaagatcacgaccaaggtggtgtgggtgaacgaatgg
ttcagcccgcccaaggaaaccgaagccgccaccgccctcatcaacggcggcgccgacgtg
ctgttccagaacaccgactcgccggccgtgctcaagaccgcgcaggaaaagggcaagcgc
gccttcggctgggattccgacatgaccgcctacggccccaaggcccacctggcctcggcc
accatcaattgggcgccgtactacatcaaggccacgcaggacgcactcgacggcaagtgg
gccacgggccaggcctggtggggcgtgaaggaaggcgccatcgacctcgtctcgatcgcc
gaggacgtgccggccgaaaccaaggccaaggtcgaggaagtgaagaagggcctgaaggac
ggcagcttcgcgatctggaagggcccgatcctgggccaggacggcaaggaagtggtcgcc
aaggatgcggtggccgacgacaagttcctgtcgggcgtgaacttctacgtcaagggcgtg
gaaggcaaggtgccgggcggggacaagaagtaa
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