Variovorax paradoxus S110: Vapar_5050
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Entry
Vapar_5050 CDS
T00916
Name
(GenBank) preprotein translocase, SecY subunit
KO
K03076
preprotein translocase subunit SecY
Organism
vap
Variovorax paradoxus S110
Pathway
vap02024
Quorum sensing
vap03060
Protein export
vap03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
Vapar_5050
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
Vapar_5050
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Vapar_5050
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
vap02044
]
Vapar_5050
Secretion system [BR:
vap02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
Vapar_5050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecY
Motif
Other DBs
NCBI-ProteinID:
ACS21652
UniProt:
C5CQ80
LinkDB
All DBs
Position
1:complement(5369261..5370574)
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AA seq
437 aa
AA seq
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MATNAATIAKTGKFGDLRRRLVFLLLALVVYRIGAHIPVPGINPDQLAALFQGQQGGILS
LFNMFSGGALSRFTVFALGIMPYISASIIMQLMTYVLPTFEQLKKEGEAGRRKITQYTRY
GALGLALFQSFSIAVALESSAGLVISPGFGFRLTAMVSLTAGSMFLMWLGEQITERGLGN
GISILIFAGIAAGLPNAIGGLASLVTTGAMNPIIALFIIAIVVLVTYFVVFVERGQRKIL
VNYARRQVGNKVYGGQSSHLPLKLNMAGVIPPIFASSIILLPATVVGWFSTGEGGFGWIK
DVAGALRPGEPIYVLLYAAAIVFFCFFYTALVFNSKETADNLKKSGAFIPGIRPGDQTAR
YIDKILVRLTLAGAVYITFVCLLPEFLILKYNVPFYFGGTSLLIIVVVTMDFMAQVQNYM
MSQQYESLLKKANFKTS
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
gtggcaactaacgcggcaacgatcgcaaagacaggcaagttcggcgacctgcgtcgccgg
ctcgtcttcttgctgctcgcgctcgtggtctatcggatcggcgcgcacattcctgtgccg
ggcatcaacccggaccagctggcggcgttgttccagggccagcagggcggcatcctgagc
ctgttcaacatgttctcgggcggggcgctctcgcgcttcaccgtgttcgcgttggggatc
atgccgtacatctcggcgtcgatcatcatgcagttgatgacctacgtgcttccgaccttc
gagcaattgaagaaggaaggcgaggccggccgccgcaagatcacgcagtacacgcgctat
ggcgcgctcggcctggccctgttccagtcgttcagcattgcagtggcgctcgagtcttcg
gccggcctggtcatctcgcccggtttcggcttccgcctgaccgccatggtgagcctcacg
gcaggttcgatgttcctgatgtggctcggcgagcagatcaccgaacggggcctgggcaac
ggcatctcgatcctgatctttgcaggtatcgcggccggtctgcccaatgccatcggcggc
ctcgcttcgctggtgaccaccggtgcgatgaatccgatcattgcgctcttcatcatcgcg
atcgtggtgctggtcacctacttcgtggtgttcgtcgaacgcggccagcgcaagatcctc
gtgaactatgcgcggcgccaggtcggcaacaaggtctatggcggccagtcgtcgcacctg
cccttgaagctgaacatggccggtgtgattccgccgatcttcgcctcctcgatcatcctg
ctgcccgcaacggtggtcggctggttcagcaccggcgaaggtggtttcggctggatcaag
gacgtggccggcgcactgcgtccgggcgagccgatctacgtgctgctgtacgctgccgcg
atcgttttcttctgcttcttctacacggcactcgtgttcaacagcaaggaaacggccgac
aacctgaagaagagcggtgcattcattccgggcatccgtccgggtgaccagaccgctcgc
tatatcgacaagattctggttcgcctgacgttggctggcgcggtgtacatcaccttcgtc
tgcctgctgcccgagttcctgatcctgaagtacaacgtcccgttctacttcggtggtacc
tccctgctgatcatcgtggtcgtcacgatggacttcatggcccaggtgcaaaactacatg
atgtcccagcagtacgaatcgctgctgaagaaggccaacttcaagacatcgtag
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