KEGG   Variovorax paradoxus S110: Vapar_5318
Entry
Vapar_5318        CDS       T00916                                 
Name
(GenBank) ABC transporter related
  KO
K10441  ribose transport system ATP-binding protein [EC:7.5.2.7]
Organism
vap  Variovorax paradoxus S110
Pathway
vap02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:vap00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    Vapar_5318
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:vap02000]
    Vapar_5318
Enzymes [BR:vap01000]
 7. Translocases
  7.5  Catalysing the translocation of carbohydrates and their derivatives
   7.5.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.5.2.7  ABC-type D-ribose transporter
     Vapar_5318
Transporters [BR:vap02000]
 ABC transporters, prokaryotic type
  Saccharide, polyol, and lipid transporters
   Ribose transporter
    Vapar_5318
SSDB
Motif
Pfam: ABC_tran AAA_21 SMC_N TsaE AAA_30 AAA_29 RsgA_GTPase AAA_22 AAA_23 AAA_25 AAA_16 Imm7 AAA_15
Other DBs
NCBI-ProteinID: ACS21920
UniProt: C5CZB2
LinkDB
Position
2:16081..17607
AA seq 508 aa
MAPIVTIRDLCKSFAGVRALDKAQFDLLPGEVHALMGENGAGKSTLMKVLAGVYGKDSGE
VLIDGQPVDIASPRAAQALGIGIIHQELNLMNHLSAAQNIFIGREPRGRFGLFIDEDTMR
TQAERIFARMNLRLDPHTPVGELTVARQQMVEIAKALSFDSRVLIMDEPTAALNNEEVAD
LFRIIGQLRSQGVAIVYISHKMDELKRIADRVTVMRDGQYIATVPMAGTPMDSLIAMMVG
RQLTEVENDFPDTSGNEVVLEARGITRGALVRNASFVLRKGEILGFAGLMGAGRTELARA
VFGADPIDAGEVLVHGRKVSIKSPEDAVRHGIGYLSEDRKHFGLATGMDVETNIALPSMK
KFLSMGVFIDQAAIEAAGERYVKQLSIKTPSVRQQVRLLSGGNQQKIVIAKWLLRDCSVL
FFDEPTRGIDVGAKAEIYRLLNQLAAEGKAIVIISSELPEILRVSHRVLVMCEGRITGEL
AGREASQEKIMQLATRRETAAAAADAAA
NT seq 1527 nt   +upstreamnt  +downstreamnt
atggcacccatcgtcaccatccgcgacctctgcaagtcctttgccggcgtgcgcgcactc
gacaaggcgcagttcgacctgctgcccggcgaggtgcatgcgctgatgggcgagaacggc
gcgggcaagtccaccctcatgaaggtgctggccggcgtctacggcaaggattccggcgaa
gtgctgatcgacggccagcccgtggacatcgcgagcccgcgcgcggcgcaggcgctgggc
atcgggatcatccaccaggaactcaacctgatgaaccacctgagcgccgcgcagaacatc
ttcatcggccgcgagccgcgcgggcgcttcggcctcttcatcgacgaagacacgatgcgc
acccaggccgagcgcatcttcgcgcgcatgaacctgcggctcgacccgcacacgccggtc
ggcgaactcacggtggccaggcagcagatggtggagatcgccaaggcgctctcgttcgac
tcgcgcgtgctcatcatggacgagcccaccgccgcgctcaacaacgaagaagtggccgac
ctgttccgcatcatcggccagctccggtcgcagggcgtggccattgtctacatctcgcac
aagatggacgaactcaagcgcatcgccgaccgcgtgaccgtgatgcgcgacggccagtac
atcgccaccgtgccgatggccggcacgccgatggactcgctgatcgcgatgatggtgggc
cgccagctcaccgaggtggagaacgactttcccgacacctcgggcaacgaggtcgtgctc
gaggcgcgcggcatcacgcgcggcgcgctggtgcgcaacgccagcttcgtgctgcgcaag
ggcgagatcctgggctttgcggggctcatgggcgcgggccgcaccgagctcgcgcgcgcg
gtgttcggcgccgaccccatcgatgcgggcgaggtcttggtgcacggcaggaaggtgtcg
atcaagtcgcccgaagatgccgtgcggcacggcatcggctatctctccgaagaccgcaag
cacttcggcctggccaccggcatggacgtggaaaccaacatcgcgctgccgagcatgaag
aagttcctgtcgatgggcgtcttcatcgaccaggccgccatcgaggccgcgggcgagcgc
tacgtgaagcagctcagcatcaagacgccctcggtgcgccagcaggtgcggctgctctcg
ggcggcaaccagcagaagatcgtgatcgccaagtggctgctgcgcgactgcagcgtgctc
ttcttcgacgagcccacgcgcggcatcgacgtgggcgccaaggccgagatctaccgcctg
ctcaaccagctggcagcggagggcaaggccatcgtgatcatctcctcggagctgcccgag
atactgcgcgtgagccaccgcgtgctggtgatgtgcgaaggccgcatcaccggcgaactg
gcggggcgcgaagcctcgcaggaaaagatcatgcagctcgccacccggcgtgaaaccgct
gccgctgcagctgacgccgccgcctga

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