Vigna angularis (adzuki bean): 108324234
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Entry
108324234 CDS
T04660
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 37-like
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
var
Vigna angularis (adzuki bean)
Brite
KEGG Orthology (KO) [BR:
var00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
var03019
]
108324234
03041 Spliceosome [BR:
var03041
]
108324234
03036 Chromosome and associated proteins [BR:
var03036
]
108324234
Messenger RNA biogenesis [BR:
var03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
108324234
mRNA cycle factors
Common to processing body (P body) and stress granule
108324234
Spliceosome [BR:
var03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
108324234
Chromosome and associated proteins [BR:
var03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
108324234
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
108324234
NCBI-ProteinID:
XP_017412600
UniProt:
A0A0L9TU08
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All DBs
Position
2:2389695..2393477
Genome browser
AA seq
467 aa
AA seq
DB search
MRTSWADSADNSAIGSGNGNFSAHPPRGAYVPPHLRNRSLSSEVPAVSHSPAPLPANDRG
NPGGAAPHQGGGYFKADQGRQQGYGSGYQTGGGWNGRGAGRDRGRREVNPFENDEADDKS
LEQENSGINFEAYDDIPVETSGDNVPPPVNTFAEIDLGEALNHNIQRCKYVKPTPVQRYA
IPISLSGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRVARTAFPMALILSPTREL
SCQIHDEAKKFSYQTGVKVVVAYGGAPITQQLRELERGVDILVATPGRLVDLLERARVSL
QMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGMRQTLLFSATFPKEIQRLASDFLS
NYVFLAVGRVGSSTDLIAQRVEYVLESDKRSHLMDLLHAQRENGIYGKQGLTLVFVETKK
GADALEHCLCVNGFPAASIHGDRTQQVSVFLVQFMYKVKSMPTFLLR
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgagaacttcgtgggcagattctgctgacaactcagccattggttctggcaatggcaat
ttctcggctcaccctccccgaggtgcatatgtgcctccgcatcttcgcaacaggtcattg
tcgtcggaggttcctgcagtgtcacactcgccggctcctttaccggcgaatgacagaggg
aatcctggtggtgcagctcctcatcagggaggtggttactttaaagctgatcaagggcgg
caacaaggatatggttctggttatcagactggtggtggctggaatggtagaggggcgggg
agggaccgtgggaggcgagaggtgaacccttttgagaatgatgaagctgatgataaatct
ctggagcaagagaacagtgggattaactttgaggcttatgatgatatccctgtggagact
agtggggacaatgtgcccccgcctgtgaatacatttgctgaaatagatttgggcgaggca
ttgaatcataatatacagagatgcaagtatgtgaaaccaaccccggttcagaggtatgcc
attccaatttccctttctgggcgagacttgatggcctgtgctcagaccgggtcaggaaag
acagctgccttttgcttccctattataagtggaataatgagggagcaatatgttcaaagg
ccacgtgtggctagaactgcttttccgatggcacttatcctctcccccacacgggaactt
tcatgtcagatacacgatgaggccaaaaagttttcttaccaaacaggtgtgaaagtggtg
gttgcttatggaggagctccaatcacacaacagttacgggagcttgagagaggagttgat
attctggtggctactccaggaagattggtggatttgctcgagagggctcgggtgtcacta
cagatgataaggtatttggcacttgatgaggcagatcggatgctggacatgggttttgag
cctcaaataagaaagatagttgaacaaatggacatgcctcctccgggcatgagacagaca
ctgttgtttagtgccacatttccaaaagagatacagagacttgcatcagattttctttca
aattatgtgtttctggctgttggaagggtcggttcaagtactgatctaattgctcaaaga
gtagaatatgttcttgagtcagacaagagaagccatctcatggatcttcttcacgctcag
agggaaaatggaatttacggcaagcaaggtctgacattagtttttgtggaaaccaagaaa
ggagctgatgctttggaacactgcttgtgtgttaatggatttcctgcagctagcattcat
ggtgacagaacacaacaagtgagtgttttcctagtccagtttatgtataaagtgaaaagc
atgccaacatttttattacgttga
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