Vigna angularis (adzuki bean): 108338958
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Entry
108338958 CDS
T04660
Name
(RefSeq) protein CHROMATIN REMODELING 35 isoform X1
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
var
Vigna angularis (adzuki bean)
Pathway
var03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
108338958
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
var03400
]
108338958
DNA repair and recombination proteins [BR:
var03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
108338958
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
Pox_A51
AAA_16
Motif
Other DBs
NCBI-GeneID:
108338958
NCBI-ProteinID:
XP_017431536
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Position
5:1489131..1495389
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AA seq
908 aa
AA seq
DB search
MESSVDVLSAKRCRSTGSSSGPDIGKRQKLSDVSDHTNPSAISDIVVHIEHGKYGSVTKE
IEDLVAIKMQILGPYFAKYPELVNQFMNVVTDHDEDTTKFEDQHDTGLTYHNVIDLAREN
IEKNVHAAPVAVIHIDSDVEDDGDKKAIVPFHEASEVEDDIHNKFIVPFHEASEEEDYRQ
NKSIVQFEIVLPLVAPSPVVMKTVRQRTPIPNRRKSKDPKIETSIAGKGVHIGVKEEEDH
QVNPEDNDGLEDIWKEMSMAMECSKVVSANPLPDEVERGHEEAERDEECDHSFILKDDLG
YVCRVCGIIDRKIETIFEFQYKVKRSTRTYAYESCNTKAKADVFANNVAEDDLIVTEFSA
HPRHMKQMKPHQIDGFNFLVRNLAGDHPGGCILAHAPGSGKTFMVISFMQSFLGRYPNAR
PLVVLPKGILSTWKKEFQTWQVEDIPLYDFYTVKADSRSQQLEVLNLWVEKKSILFLGYK
QFSSIVCDKGTNHISSSCQKILLRSPSILILDEGHNPRNENTDMVQSLAKVHTPRKVVLS
GTLYQNHVREVFNILDLVRPKFLKMETSKAIRRRIYSRVHIPGVRTFCDIVENTLKGTDF
KAKVAVIQDLREMTNSVLHYYKGDFLDELPGLVDFTVVLNLNHTQKLDIEKLKKSSGKFK
ISSVGSAVYLHPKLKSLAEKCGENNISDDIIDALIEKSDARDGVKSKFFWNMLNLCESAG
EKLLVFSQYLLPLKYLERLTIQSKGWSLGKEIFVISGESSYEQREWSMERFNNSPGAKVF
FGSIRACGEGISLVGASRIVILDVHLNPSVTRQAIGRAFRPGQQKKVFVYRLVSADSPEE
EDNSICFKKELISKMWFEWNKYCGDRAFEVEKVLLKECGDLFLESPLLGEDVKALYKRSV
TIPPNFCI
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atggagtcctctgttgacgtgttgtcagctaagcgctgtcgttcaaccggatcttcctct
ggccctgacataggcaaaagacagaagttatcagatgtctctgaccatacgaatccatct
gcaatttcggatattgtggttcatatagagcatgggaaatatggaagtgtcacaaaggag
atagaggaccttgtagccataaaaatgcagatacttggaccttactttgcaaagtatccc
gaacttgttaatcaattcatgaatgtggtaactgaccacgatgaagacactactaaattc
gaagatcaacacgacactggtttgacatatcataatgtcatagatttggcgagggaaaac
attgagaagaatgttcatgcagctccagttgctgttattcacattgattcagatgtggaa
gatgatggagataaaaaagctattgttccttttcatgaagcttcagaagtggaagatgat
atacacaataaatttattgttccatttcatgaagcttcagaagaagaagattatagacaa
aataaatcaattgttcagtttgaaattgtgttgccgctagttgcaccgtctcctgttgtg
atgaagacagttaggcagcgtactcccattcctaaccgtcgcaaaagtaaagatccgaaa
attgagacaagtatagcgggtaaaggtgttcatatcggtgtaaaggaggaagaggatcat
caggtcaaccccgaagataatgacggcttagaagatatttggaaggagatgtcgatggca
atggagtgttccaaagttgtttccgcgaatcctctgccagatgaagtagaaagaggccat
gaagaagcagaaagagatgaggagtgcgatcattcttttattttaaaagatgatcttggt
tatgtttgtcgggtttgtggaattattgaccgaaaaattgaaaccatatttgagtttcag
tacaaggttaaacggagcacaaggacttatgcatatgaatcctgtaacaccaaagcaaaa
gcagatgtatttgcaaataatgttgctgaagatgatctcatagtaactgaattctcagca
catcctagacacatgaaacagatgaaacctcatcaaattgacggattcaattttcttgtt
agaaatcttgcgggtgatcatcctggtggctgcatcttagcccatgctccagggtcaggg
aaaacattcatggtaataagtttcatgcaaagttttctaggcaggtatcctaatgcaaga
ccattggtggtgcttccaaagggaatattgtcaacatggaaaaaggagtttcaaacatgg
caagtggaggacatacctctatacgacttttatacagtgaaggcagatagtagaagtcaa
caactggaagtgttgaatctatgggtggagaagaaaagtatccttttcttaggatacaaa
cagttctcctctattgtctgtgataaggggaccaaccatatatcgtcatcatgccaaaag
attttactcaggagtccttcaatacttattttagacgaggggcataatcctaggaatgaa
aacacagatatggttcaatcccttgcaaaagttcacacacctagaaaagttgttctgtcg
ggaactctttatcaaaatcatgtcagggaggtatttaacattctagatcttgttcgtcca
aagtttttgaagatggaaacatcaaaagctatccgcaggcgcatttatagtagagttcat
ataccaggtgtgagaaccttctgtgatattgttgaaaacactttgaagggcacagacttt
aaagcaaaagtagccgtcatacaagatttacgtgagatgacaaacagcgtccttcattat
tataaaggggattttcttgatgagcttcctggtcttgttgattttactgtggttctcaat
cttaaccatacacaaaagcttgacattgaaaaattaaaaaagtcatctggaaagttcaag
atatcttctgtaggaagcgccgtgtatttgcaccctaaactgaaatctttagctgaaaaa
tgtggagaaaataatatatctgatgatataattgatgctctgatagaaaaatcagacgcc
agagatggtgtgaagtccaaattcttttggaacatgctaaatttgtgtgaatcagccgga
gagaaactccttgtatttagtcaatacttgctacctttgaaatatttagaaagattaacc
attcaaagtaaagggtggagtctaggaaaggaaatatttgtaatctcaggagaatcgagc
tatgagcagcgagaatggtccatggaaagatttaacaattctcctggtgccaaagtcttc
tttggctccatcagggcttgtggagagggcatatcattggtcggggcatcacgcatagtt
atattggacgttcatcttaatccttcagttactcgccaagctattggtcgtgcattcaga
cctggccagcagaagaaagtctttgtgtatcgattggtgtctgctgattctccagaagag
gaggataacagcatttgtttcaagaaggaattaatttcaaaaatgtggtttgaatggaac
aagtattgtggtgatcgagcatttgaagttgagaaagttcttctgaaagagtgtggcgat
ctttttcttgagagtccattacttggagaagatgtaaaagctctgtacaaacggtcagtg
accattccccccaatttttgtatataa
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