KEGG   Vigna angularis (adzuki bean): 108339070
Entry
108339070         CDS       T04660                                 
Name
(RefSeq) DNA-directed RNA polymerase V subunit 1
  KO
K16251  DNA-directed RNA polymerase V subunit 1 [EC:2.7.7.6]
Organism
var  Vigna angularis (adzuki bean)
Pathway
var03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:var00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    108339070
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:var03021]
    108339070
Enzymes [BR:var01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     108339070
Transcription machinery [BR:var03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     108339070
SSDB
Motif
Pfam: RNA_pol_Rpb1_2 DUF3223 RNA_pol_Rpb1_5 RNA_pol_Rpb1_3
Other DBs
NCBI-GeneID: 108339070
NCBI-ProteinID: XP_017431710
LinkDB
Position
8:complement(574634..590090)
AA seq 1917 aa
MGKYVILCQHLETQLPTLSPSASGSGFVQRLVSPCCEVSAAEVSIRDVKTSDGACYLALK
VSKSKMHPDFWGFLEKYGYRYEGDHTRALLPCEAMEIIKRIPLETKRKLAGKGYFPQDGY
LLKYLPVPPNCLSVPEVSDGVSVMASDPSITILRKLLRKVEIIKSSRSGEPNFESHHVEA
NDLQSVVDQYFQIRGTSKAARAIETRFGVNKELNESSTKAWLEKMRTLFIRKGSGFSSRN
VITGDCYRRINEVGIPVEVAQRVTFEERVNIHNIGYLQKLVDENLCLTYKEGMSTFSLRD
GSKGHIYLKPGQIVQRRIMDGDIVFINRPPTTHKHSLQALFVYIHDDHTVKINPLICGPL
GADFDGDCVHLFYPQSLAAKAEVVELFSVENQLLSSHSGNLNLQLTTDSLLSLKMLVKRC
FFDRVAANQLAMFLVPLPQAGLMKANSGNSYWTSIQMLQCALPLCFDCSGGRYLIRQSEI
LEFDFNRDVLPATVNEIAASIFFSKGPKEALKFFDVLQPFLMESIFADGFSVSLQDFSIS
RAIKRIISRSIGKLSSLLYQLRSVYNELVAQQLEKLIRDIELPVINFALKSTKLGDLIDS
KSKSAIDKVVQQIGFLGQQLFDRGKFYSKGLVEDVTSHFHVKCCYDGDGYPSAEYGLLKG
SFFNGLDPYEEMVHSISTREIMVRSSRGLSEPGTLFKNLMAILRDVVICYDGTVRNICSN
SIIQFEYGLEKTEHLFPAGEPVGVLAATAMSNPAYKAVLDASPSSNSSWELMKEILQCKV
NFKNEPVDRRVILYLNDCDCGGSYCRENAAYKVKDQLRKVNLKDASVEFIIEYQEQRMRK
GNSETDAGLVGHIYLDEMMLEELKISMANIFQKCSDRLKSFSRRKKANEFLNKTELSFSE
SCSASHSAAPCLTFIWVDDRNNEFDRTVKILSEEICPVLLDTIIQGDPRISSASIIWVSP
DTNTWVRNPYKSSNGELALDIILEKDVVKQSGDAWRIVLDSCLPVLHLIDTRRSIPYAIK
QIQELLGISCTFDQAIQRVAASVKMVAKGVLREHLILLASSMTCGGNLVGFNTGGYKALC
RQLNIQVPFTDATLFTPKKCFERAAAKCHTDSLSSVVASCSWGKHVAVGTGSKFDVVWDA
NKIRSSEIKGMDVYSFLHMVGGHTDGEEETDACLGEDIDDLLEEENLDLEMSSPHNSGFK
AVFEDNPEVLNDSTSNGWDVNLNQSESKSNGWGANITGQANTNSNEWSGWGNNNSEIPAG
GTENMQGSWGSGRRKDVTQEDNFASGAWGANRTDHTETKSNDWGRNNKSEILASGSEKDS
WGSSKLKDDVRKNNIGSSAWDAGSTGQTKAKSNEWSGWGNNQSEIPAGGSENVRDSWGSD
KGKDDVTQVDNSAYGSWGGNRRDQTKAKSNESSGWGRNQSEMQPGGSKNVREDSWDSGKL
KDDTQNDNSESGAWGASSKGQIESKSNEWSGWGKNKSEKAGEFENVQDSWGSGKRKDVTQ
VDNSESGAWGARSTGQIESKSNEWSGWGKNKSEKAGEFENVQDSWGSGKRKDVTQVDNSV
SGSWGGSRGDQTNTKSNELSGWGRNKSVIPASGTENAQDSWGSSILKDDVTQKDNSTSGS
WGANKTGSSKTEVDEWARNKVEAIDGGSEKPQEDSWNSGNWKADSKVGNNSWGKAKSSGS
QSWDSQNQSNQNSTSRGWESHIASANSDSEKGFQWGKQGRESFKKNRFEGSQGRGPNGGD
WKNRNRPPRPPGQRLDLYSSEEQDVLKEIEPIMQSIRRIMQQQGYNDGDPLAAEDQQFIL
ENVFEHHPDKETKMGAGIDYVMVNRHSSFQDSRCFFVVLKDGRREDFSYRKCLDNRIRKK
YPADLAEAFVNKYFRVFRNRGDQTANPRGDQTRMPVQDEASTPADQTSTPGPVETNE
NT seq 5754 nt   +upstreamnt  +downstreamnt
atgggtaaatatgtcattttatgtcaacacctcgaaactcagcttccaacactttctcct
tcagcatcaggcagtggctttgtgcagagattagtatctccttgttgtgaggttagtgct
gctgaagtttctataagggatgttaaaacaagtgatggggcttgttatctagcactcaag
gtatccaaatccaagatgcatcctgatttttggggttttttagaaaaatatggctatcgc
tatgagggtgatcatactcgagccttacttccttgtgaggcaatggaaattattaagaga
atcccattagaaaccaaaagaaagcttgctggaaaagggtattttcctcaagatggatat
cttttgaagtatcttccagtgccacctaattgcttgtcagtaccagaagtttcagatggc
gttagtgtcatggcttcggatccttccattacaattctcagaaaattgctcaggaaggtt
gaaatcatcaaaagttctagatctggagaaccaaattttgagtctcatcacgtggaagca
aatgatttgcagtcagttgttgatcagtattttcaaattaggggcacttctaaggcagca
cgtgctattgaaacacgttttggggttaataaagagcttaatgaatcatcaacgaaagca
tggctagagaaaatgcggactttatttataagaaaaggttcaggtttttcttcccggaat
gtgataactggagattgttatagaaggataaatgaagtagggattccggttgaagttgcc
caacgagtaacatttgaggagagagttaacatccataacataggttatttgcagaaatta
gttgatgaaaatctgtgccttacttacaaggagggtatgtcaactttttcactcagggat
ggctcaaagggtcacatatatttgaagcctggtcagatagtacagcgaaggattatggac
ggggatatcgtcttcattaacaggccacctacaacacacaaacactctttacaggcactt
tttgtttacatccatgatgaccacactgtgaaaataaatcctttaatttgtggaccactt
ggggctgattttgatggtgattgtgtccatctgttttatccacagtcactagctgccaaa
gcagaagttgtggagttattttctgtcgagaatcaactgctcagctctcacagtggcaat
ttgaatttacagttaaccacagattcgttgttgtcactgaagatgttggtcaagagatgt
ttttttgatagagtggcagctaatcaattggctatgtttcttgtacctttgcctcaagct
ggtttgatgaaggccaattctggtaattcttattggacttccatccaaatgttacagtgt
gctctccctttgtgttttgattgctctgggggacggtatttgattaggcagagtgaaatc
ttagaattcgattttaatagggatgttttgcctgcaacagtaaatgaaatagcagcctca
attttctttagcaagggtccaaaggaggcactgaagttctttgatgtgttgcagcctttt
ttgatggaaagtatatttgctgatgggtttagtgttagcctgcaagatttttccatatcc
agggcaattaaaagaattataagcagaagcataggaaaactttcttctctcttgtatcag
ctgaggtctgtttacaacgagctggtggcgcaacaattggagaagcttattcgtgatatt
gaacttcctgttattaattttgctctaaagtcaaccaaactaggagatttaattgattca
aagagtaaatctgcaattgataaggttgttcagcagattggtttcttagggcagcaactt
tttgataggggaaaattctattcaaaaggattggtggaagatgtaacatctcattttcac
gtgaagtgttgttatgatggggatggttatccctctgctgagtatgggttgctcaaaggg
tcttttttcaatggtttggatccatatgaagagatggtgcattcaatttcaacaagggaa
ataatggtgcgttcttcaaggggattatctgaaccaggaacgctcttcaagaatttgatg
gccattcttcgggatgttgttatctgttatgatggaactgttagaaatatttgcagtaat
tccattatccagtttgaatatggattagagaaaactgagcacctattccctgctggtgag
cctgtaggcgtcttagcagcaactgctatgtcaaatcctgcttacaaagctgtccttgat
gctagtcccagtagcaattcctcatgggagttgatgaaggaaatactacaatgcaaggtc
aattttaagaatgaacctgttgatcggcgtgttattttgtacctgaacgactgtgattgt
ggagggagttattgtcgtgaaaatgcggcatataaagttaaagatcaattgagaaaagtc
aatcttaaggatgcatcagtggagtttattattgaataccaagaacagcggatgcgaaag
ggaaattctgaaaccgatgctggacttgttggtcatatttatctggacgagatgatgtta
gaagagctgaagatcagcatggccaacatttttcagaaatgctcggatagactaaaatcc
tttagtcggagaaagaaagctaatgaatttctgaataagaccgaattgtcgtttagtgag
tcttgctcggcttcacattctgctgccccgtgtttaacattcatttgggttgatgatcgt
aataatgaatttgatcgaactgtaaagatcctatcggaagaaatctgccctgtgctgtta
gatacaataatccaaggagacccacgcattagctctgcaagtataatttgggttagtccg
gatacaaacacatgggttcgaaacccttataaatcttctaatggtgaactggcactggat
attattcttgagaaggatgtagtcaagcagagtggtgatgcttggaggattgtacttgat
tcctgccttcctgttcttcatttgattgataccaggcgttcaatcccatacgctattaag
cagattcaagaattgttggggatatcttgcacttttgatcaagcgattcagcgtgttgcg
gcatctgtgaaaatggtggcaaaaggtgttcttagagagcatctaattttgttagctagt
agtatgacatgtggtgggaacctggttggctttaacacagggggatataaagccctctgt
cgacaactaaatattcaagtaccattcacagatgcaacactctttacacctaaaaaatgt
tttgagcgagctgctgcgaaatgtcatactgactctctgtcaagcgtagttgcatcctgt
tcctggggtaaacatgtggcagttggtacaggatcaaaatttgatgttgtttgggatgca
aataagataagatcaagtgaaattaaaggaatggatgtttacagttttcttcacatggtt
ggaggtcatactgatggggaagaagaaactgatgcttgtttgggtgaagatattgatgat
ttgctggaagaagaaaatttggatttggaaatgtcctcaccacataactctggttttaag
gctgtcttcgaagacaatcctgaagtactgaatgattcaacatccaatggttgggatgta
aatttaaatcagagtgaatcaaaatcaaatggttggggtgcaaacataacaggtcaggca
aacacaaattctaatgaatggtctggctggggaaacaataattctgaaataccagccggt
ggaaccgaaaatatgcaaggctcttggggctctggtaggaggaaagatgtaacccaagaa
gacaattttgcatcaggtgcttggggtgcaaacagaacagatcatacagaaacaaaatct
aatgactggggaaggaataataagtctgaaatacttgctagtggatctgaaaaagattct
tggggctcaagtaaattgaaagatgatgtacgaaaaaacaatattggttctagtgcttgg
gatgcaggaagcacaggtcagacaaaagcaaaatctaatgaatggtctggatggggaaat
aatcagtctgaaataccagctggtggatcagaaaatgtgcgagattcctggggctctgac
aaggggaaagatgatgttacccaagtagacaactccgcatatggttcttggggtggaaac
agaagagatcagacaaaagcaaaatctaatgaatcgtcaggctggggaaggaatcaatca
gaaatgcaacctggaggatctaaaaatgtaagagaagattcttgggactcaggtaaattg
aaagatgatacccaaaatgacaattctgagtctggtgcctggggtgcaagcagcaaaggc
cagatagaatcaaaatctaatgaatggtcaggctgggggaagaataagtctgaaaaagcc
ggtgaatttgaaaatgtgcaggattcttggggctcgggtaagaggaaagatgttacccaa
gtagacaattctgagtctggtgcctggggtgcaagaagcacaggccagatagaatcaaaa
tctaatgaatggtcaggctgggggaagaataagtctgaaaaagctggtgaatttgaaaat
gtgcaggattcttggggctctggtaagaggaaagatgttacccaagtagacaactctgtg
tctggttcttggggtggaagcagaggagatcaaactaacacaaaatctaatgaattgtct
ggctggggaaggaataaatcggtaataccagctagcggaactgaaaatgcacaagattct
tggggctcaagtatattgaaagatgatgttacccagaaagataattccacctctggttct
tggggtgcaaacaaaacaggttcgtcaaaaactgaagtagatgagtgggctagaaataaa
gttgaggcaatagatggtgggtcagaaaagccccaagaagattcttggaactcaggtaat
tggaaagctgactcaaaagttggcaataactcttggggaaaagccaaatcctctggaagt
caatcatgggattcccaaaatcagtcaaatcaaaattcaacttcacggggatgggaatca
catattgcttcagctaattcagatagtgagaaaggttttcagtggggtaagcaaggtaga
gaatctttcaagaaaaatcgctttgaaggttcacaaggtcgcggtccaaatggtggcgac
tggaaaaataggaatcgcccacctagaccacctggacagagattggacttatattcatct
gaggagcaggatgtgctgaaggagatcgaacctattatgcagtctatcagacgaatcatg
caacaacaggggtacaacgatggggacccgctggctgctgaagatcaacaatttatactt
gagaatgtctttgagcaccacccagataaagaaaccaaaatgggtgctggaattgattat
gtcatggttaacagacacagcagttttcaggatagcagatgctttttcgtggttttgaaa
gatggtcgaagagaagatttttcctaccgtaaatgcttggataaccggataagaaagaag
tatccagctgaccttgctgaagcattcgtcaataaatattttcgagttttccgtaatagg
ggggaccaaactgcaaacccaaggggggaccagactagaatgccagtgcaggacgaagct
tctacaccggctgaccagacctcaacacccggccctgtggaaacgaatgagtag

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