Vigna angularis (adzuki bean): 108344551
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Entry
108344551 CDS
T04660
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
var
Vigna angularis (adzuki bean)
Pathway
var00040
Pentose and glucuronate interconversions
var01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
var00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
108344551
Enzymes [BR:
var01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
108344551
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Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
Motif
Other DBs
NCBI-GeneID:
108344551
NCBI-ProteinID:
XP_017438472
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Position
8:4522792..4524586
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AA seq
439 aa
AA seq
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MGGSDAKVVFTLLVTLAITIPCLEAGIAKYDDFLKAQAEEAHEIALESYVPTPELVTGEL
NYHVHRALKNRTRRGLNEAKNPIGGRCDSSNPIDNCWRCNKDWANDRYRLARCGKGFGRR
AVGGLGGPIYVVTDNSDEDMVNPKPGTLRYAVTQKGPLWIIFQRSMIITLKQELLISSDK
TIDGRGANVQIKDGGGLTIQFANNVIIHGIRVKNIVPKEGGMIRDSYDHVGLRTRSDGDA
ISLFGASNVWIDHVSLSNSADGLIDVIQGSTAITISNCHMTRHNDVMLFGATDSYTEDKI
MQITVAFNHFGQGLIQRMPRCRWGFFHVLNNDYTHWMMYAIGGSAGPTILSQGNRFIAPN
NDAAKEITHRDYATPDVWKNWQWQSDMDLLMNGATFNTSGAPIKITHKKGLIMKPRDGSH
VSRLTRHAGALNCFVGLPC
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgggaggaagtgatgcgaaggttgtcttcaccctgttggtcactctggccatcaccatc
ccatgccttgaggctggcattgctaaatacgacgactttctgaaagctcaagctgaagaa
gcccacgaaatcgctctcgagtcctatgtgccaactcctgaattggtcaccggtgagctg
aattaccacgttcatcgtgccttgaaaaacagaacaaggaggggactgaatgaggccaag
aaccctattggagggcgctgtgacagcagcaaccccattgacaattgctggaggtgcaac
aaagactgggccaacgacaggtatcggttggccagatgcggaaaagggttcggaagacgc
gcagtgggtgggctcggtggacccatttacgttgtcaccgataactccgacgaggacatg
gtcaaccctaagccaggaaccctccgatatgccgtcactcaaaagggtccactttggatc
atcttccaacgcagcatgatcatcactctgaagcaggagcttctcatttcctccgacaag
accatcgacggtcgtggtgccaacgttcagatcaaggacggtggtggcctcaccatacag
ttcgcgaacaacgtcatcatccacggaattcgcgttaagaacattgtgcctaaggagggt
ggcatgatcagggactcctacgaccacgttggactgagaacgaggagtgatggtgatgcc
atctccctcttcggagcctccaacgtgtggatcgatcatgtttctctctctaactctgcc
gatggactgatcgatgtgatccaaggctcaacagccatcaccatctccaactgccacatg
acgagacacaacgatgtgatgttgttcggtgcgactgactcgtacacggaggacaagatc
atgcagataacagtggcattcaaccatttcgggcagggactgatccagaggatgccaagg
tgcagatggggattcttccacgttcttaacaacgattacactcactggatgatgtacgcc
attggtggaagcgcagggcctactattcttagccaaggaaaccgtttcattgctcccaac
aacgacgctgcaaaggagatcacacacagagattatgctacaccggacgtctggaagaac
tggcagtggcaatccgacatggaccttctcatgaacggtgccactttcaacacttcaggt
gctcccatcaagattacacacaagaagggtctcatcatgaagccaagagatggcagtcat
gtcagcagactcacacgccatgctggcgctctcaactgctttgttggtttgccttgctag
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