Vigna angularis (adzuki bean): 108345000
Help
Entry
108345000 CDS
T04660
Name
(RefSeq) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
var
Vigna angularis (adzuki bean)
Pathway
var00040
Pentose and glucuronate interconversions
var01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
var00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
108345000
Enzymes [BR:
var01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
108345000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
108345000
NCBI-ProteinID:
XP_017439038
UniProt:
A0A0L9VMG9
LinkDB
All DBs
Position
8:10807778..10810456
Genome browser
AA seq
404 aa
AA seq
DB search
MAALSCFILLFALSLLTRSFVSSSAVPDPELVVQEVQRSINASRRNLGYLSCGTGNPIDD
CWRCNPNWENNRQRLADCAIGFGKDAIGGRNGRIYEVTDSGNDDAVNPKPGTLRYAAIQD
EPLWIIFKRDMVITLKQELLVNSFKTIDGRGASVHIAGGGCITIHYVSNVIVHGIHIHDC
KPTGNTNIRDSPEHSGFWTKSDGDGISIFNSKHIWIDHNSLSNCQDGLIDAIHGSTAITI
SNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTH
WEMYAIGGSANPTINSQGNRFLAPDIRFSKEVTKHEDAPQSEWMSWNWRSEGDMFLNGAY
FRQSGAGASSIYARASSLSARPSSLVGSMTVTAGALTCRKGNRC
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atggctgccctttcatgtttcattcttctttttgctctttctcttctcacacgctctttt
gtttcttcctctgcagttccagatcctgaattggttgttcaagaggtacaaagaagcatc
aatgcctcaaggagaaacttgggttatttatcatgcggaaccgggaatcccatcgacgac
tgctggcggtgcaaccctaactgggagaacaaccgccagagactagcggactgcgccatc
gggttcggcaaggacgccatcggcggaagaaacggccgaatatacgaggtcacagactcc
ggcaacgacgacgccgtgaacccaaagccgggaaccctccgttacgccgccatacaagac
gaacccctgtggataatcttcaagagggacatggtcatcacgctaaagcaagagcttctg
gtgaactctttcaagacaatcgacggcagaggcgcgagcgtgcacatcgccggtgggggc
tgcatcaccatacactacgtaagcaacgtgatcgttcatgggattcacattcacgattgc
aagcccaccgggaacaccaacatcagagactcgccggagcactccgggttttggacgaaa
tcggacggagacggaatctccatctttaactcgaagcatatttggatcgatcataactcg
ctgtcgaattgtcaggatgggctgatcgatgccattcatggatccactgccatcaccatc
tccaacaattacatgacccaccatgacaaggttatgcttttgggacacagtgattcctac
acgcaggacaagaacatgcaggtcaccatagccttcaatcattttggagaaggtcttgtc
caaagaatgccaagatgcagacacgggtattttcatgtggtgaacaacgactacacacac
tgggaaatgtatgccattggagggagtgcgaacccgaccatcaacagccaaggaaacagg
tttcttgctccagacattaggttcagcaaagaggtaacaaagcatgaggatgctccacag
agtgagtggatgagctggaattggagatcagagggtgacatgttcttgaatggagcatac
ttcaggcaatctggtgctggtgcttcttccatctatgctagagcttcaagtctcagtgca
agaccttcttctcttgttggatccatgaccgtcactgctggtgcacttacctgcagaaag
ggaaaccgttgctga
DBGET
integrated database retrieval system
