Variovorax sp. 38R: IG196_07605
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Entry
IG196_07605 CDS
T10235
Name
(GenBank) polyprenyl synthetase family protein
KO
K00795
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
vav Variovorax sp. 38R
Pathway
vav00900
Terpenoid backbone biosynthesis
vav01100
Metabolic pathways
vav01110
Biosynthesis of secondary metabolites
Module
vav_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
vav00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
IG196_07605
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
vav01006
]
IG196_07605
Enzymes [BR:
vav01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
IG196_07605
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
IG196_07605
Prenyltransferases [BR:
vav01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
IG196_07605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
QOF80247
LinkDB
All DBs
Position
1713629..1714564
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AA seq
311 aa
AA seq
DB search
MSAVPMTSTPTTATPWDAKTLANWAEPHLVAVEAALSRWVGVDAPVLLGDAMRYAVLDGG
KRLRPLLVLAANEAVGGNAHAALRAACATELIHAYSLVHDDLPCMDNDVLRRGKPTVHVK
FGEADALLAGDALQALAFELLAPEGDEVPAAMQALLCRLLARAAGSQGMAGGQAIDLASV
GIALNETQLREMHRLKTGALLQGSVEMGAACGTVSPAALAALRDYGAAIGLAFQVVDDIL
DVTADSHTLGKTAGKDAAADKPTYVSLLGLDGARAQASQLLADAIAALNKSGLTDTAALR
ALAHMVVDRDR
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccgtcccgatgacctccacccccaccaccgccaccccctgggacgcgaagacg
ctggccaactgggccgagcctcatctggtcgcggtcgaagcggcgctgtcgcgctgggtc
ggcgtcgatgcgccggtgctgctgggcgacgccatgcgctatgccgtgctcgacggcggc
aagcggctgcggccgctgctggtgctcgcggccaatgaagcggtcggcggcaacgcgcac
gccgcgctgcgtgcggcctgcgccaccgaactcatccacgcctattcgctggtgcacgac
gacctgccgtgcatggacaacgacgtgctgcgccgcggcaagcccacggtgcacgtgaag
ttcggcgaagccgacgcgctgctcgcgggcgacgcgctgcaggcactggccttcgagctg
ctcgcgcccgagggcgacgaggtgcccgccgcgatgcaggccctgctgtgccgcctgctg
gcgcgcgcggccggcagccagggcatggccggcggccaggccatcgacctggccagcgtc
ggcatcgcactcaacgaaacccagctgcgcgaaatgcaccgcctgaagaccggcgcgctg
ctgcagggcagcgtcgagatgggcgccgcctgcggcaccgtgtcgccggccgcgctggcg
gctctgcgcgactacggcgccgccatcggcctggcgttccaggtggtcgacgacatcctc
gacgtcacggccgactcgcacaccctgggcaagaccgccggcaaggacgccgcggccgac
aagcccacctacgtgtcgctgctcggcctggacggcgcgcgcgcgcaggcgagccagctg
ctcgccgacgccatcgccgcactgaacaagagcggcctgacggacactgccgccctgcgc
gccctggcccacatggtggtcgaccgcgaccgctga
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